ISDA: 3RM6

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: 18Z

IUPAC Name: 2-{[(2-aminopyrimidin-5-yl)methyl]amino}-5-nitro-4-{[2-(piperazin-1-yl)ethyl]amino}benzamide

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: c1cc(NCCN2CCNCC2)cc(NCc2cncnc2)c1

InChI: InChI=1S/C17H24N6/c1-2-16(21-6-9-23-7-4-18-5-8-23)10-17(3-1)22-13-15-11-19-14-20-12-15/h1-3,10-12,14,18,21-22H,4-9,13H2

InChI Key: VOCCUHHXYLBIPN-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C18 H25 N9 O3

Molecular weight: 415.450

Hydrogen Bond Acceptor: 10

Hydrogen Bond Donor: 5

Rotatable Bonds: 10

Heavy Atoms: 30

Systematic name

Program	Version	Descriptor
ACDLabs	12.01	2-{[(2-aminopyrimidin-5-yl)methyl]amino}-5-nitro-4-{[2-(piperazin-1-yl)ethyl]amino}benzamide
OpenEye OEToolkits	1.7.2	2-[(2-azanylpyrimidin-5-yl)methylamino]-5-nitro-4-(2-piperazin-1-ylethylamino)benzamide

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	[O-][N+](=O)c3cc(C(=O)N)c(NCc1cnc(nc1)N)cc3NCCN2CCNCC2
SMILES_CANONICAL	CACTVS	3.370	NC(=O)c1cc(c(NCCN2CCNCC2)cc1NCc3cnc(N)nc3)[N+]([O-])=O
SMILES	CACTVS	3.370	NC(=O)c1cc(c(NCCN2CCNCC2)cc1NCc3cnc(N)nc3)[N+]([O-])=O
SMILES_CANONICAL	OpenEye OEToolkits	1.7.2	c1c(c(cc(c1[N+](=O)[O-])NCCN2CCNCC2)NCc3cnc(nc3)N)C(=O)N
SMILES	OpenEye OEToolkits	1.7.2	c1c(c(cc(c1[N+](=O)[O-])NCCN2CCNCC2)NCc3cnc(nc3)N)C(=O)N
InChI	InChI	1.03	InChI=1S/C18H25N9O3/c19-17(28)13-7-16(27(29)30)15(22-3-6-26-4-1-21-2-5-26)8-14(13)23-9-12-10-24-18(20)25-11-12/h7-8,10-11,21-23H,1-6,9H2,(H2,19,28)(H2,20,24,25)
InChIKey	InChI	1.03	IDZSPROLKKFEMF-UHFFFAOYSA-N

Chemical Database Mapping

Database	Reference ID
PubChem	57519680
ZINC	ZINC000095920640