Structural Complex
Chemical ID: RFZ
IUPAC Name: 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2c(c1)ncn2[C@H]1CCCO1
InChI: InChI=1S/C11H12N2O/c1-2-5-10-9(4-1)12-8-13(10)11-6-3-7-14-11/h1-2,4-5,8,11H,3,6-7H2/t11-/m1/s1
InChI Key: ZRNBULRZQUQJID-LLVKDONJSA-N
Physiochemical Descriptor:
Formula: C12 H12 Cl2 N2 O4
Molecular weight: 319.141
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 20
Systematic name
Program Version Descriptor
ACDLabs 10.04 5,6-dichloro-1-beta-D-ribofuranosyl-1H-benzimidazole
OpenEye OEToolkits 1.5.0 (2R,3R,4S,5R)-2-(5,6-dichlorobenzimidazol-1-yl)-5-(hydroxymethyl)oxolane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 Clc2cc1ncn(c1cc2Cl)C3OC(C(O)C3O)CO
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3cc(Cl)c(Cl)cc23
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3cc(Cl)c(Cl)cc23
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1c2c(cc(c1Cl)Cl)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O
SMILES OpenEye OEToolkits 1.5.0 c1c2c(cc(c1Cl)Cl)n(cn2)C3C(C(C(O3)CO)O)O
InChI InChI 1.03 InChI=1S/C12H12Cl2N2O4/c13-5-1-7-8(2-6(5)14)16(4-15-7)12-11(19)10(18)9(3-17)20-12/h1-2,4,9-12,17-19H,3H2/t9-,10-,11-,12-/m1/s1
InChIKey InChI 1.03 XHSQDZXAVJRBMX-DDHJBXDOSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB08473
ChEMBL CHEMBL375530
PubChem 5894
ZINC ZINC000003873418
SureChEMBL SCHEMBL62273