Structural Complex
Chemical ID: DK5
IUPAC Name: 1-(2,3-dideoxy-3-fluoro-beta-D-arabino-hexopyranosyl)-4-[(phenylcarbonyl)amino]pyrimidin-2(1H)-one
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(Nc1ccn([C@H]2CCCCO2)c(=O)n1)c1ccccc1
InChI: InChI=1S/C16H17N3O3/c20-15(12-6-2-1-3-7-12)17-13-9-10-19(16(21)18-13)14-8-4-5-11-22-14/h1-3,6-7,9-10,14H,4-5,8,11H2,(H,17,18,20,21)/t14-/m1/s1
InChI Key: AXHMSEKQNRTPDR-CQSZACIVSA-N
Physiochemical Descriptor:
Formula: C17 H18 F N3 O5
Molecular weight: 363.340
Hydrogen Bond Acceptor: 7
Hydrogen Bond Donor: 3
Rotatable Bonds: 6
Heavy Atoms: 26
Systematic name
Program Version Descriptor
OpenEye OEToolkits 1.6.1 N-[1-[(2R,4R,5R,6R)-4-fluoro-5-hydroxy-6-(hydroxymethyl)oxan-2-yl]-2-oxo-pyrimidin-4-yl]benzamide
Chemical Descriptors
Type Program Version Descriptor
SMILES_CANONICAL CACTVS 3.352 OC[C@H]1O[C@H](C[C@@H](F)[C@@H]1O)N2C=CC(=NC2=O)NC(=O)c3ccccc3
SMILES CACTVS 3.352 OC[CH]1O[CH](C[CH](F)[CH]1O)N2C=CC(=NC2=O)NC(=O)c3ccccc3
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 c1ccc(cc1)C(=O)NC2=NC(=O)N(C=C2)[C@H]3C[C@H]([C@@H]([C@H](O3)CO)O)F
SMILES OpenEye OEToolkits 1.7.0 c1ccc(cc1)C(=O)NC2=NC(=O)N(C=C2)C3CC(C(C(O3)CO)O)F
InChI InChI 1.03 InChI=1S/C17H18FN3O5/c18-11-8-14(26-12(9-22)15(11)23)21-7-6-13(20-17(21)25)19-16(24)10-4-2-1-3-5-10/h1-7,11-12,14-15,22-23H,8-9H2,(H,19,20,24,25)/t11-,12-,14-,15+/m1/s1
InChIKey InChI 1.03 JDMVJAAWOFCRPK-GBOPCIDUSA-N
Chemical Database Mapping
Database Reference ID
PubChem 44126826
ZINC ZINC000049072201