ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: TM3

IUPAC Name: 2-[[6-[[[2-(3-hydroxypropyl)-5-methylphenyl]amino]methyl]-2-[[3-(4-morpholinyl)propyl]amino]-1H-benzimidazol-1-yl]methyl]-6-methyl-3-pyridinol

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: c1ccc(NCc2ccc3nc(NCCCN4CCOCC4)n(Cc4ccccn4)c3c2)cc1

InChI: InChI=1S/C27H32N6O/c1-2-7-23(8-3-1)30-20-22-10-11-25-26(19-22)33(21-24-9-4-5-12-28-24)27(31-25)29-13-6-14-32-15-17-34-18-16-32/h1-5,7-12,19,30H,6,13-18,20-21H2,(H,29,31)

InChI Key: XBJCUODXCJCZKZ-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C32 H42 N6 O3

Molecular weight: 558.714

Hydrogen Bond Acceptor: 9

Hydrogen Bond Donor: 4

Rotatable Bonds: 17

Heavy Atoms: 41

Systematic name

Program	Version	Descriptor
OpenEye OEToolkits	1.6.1	2-[[6-[[[2-(3-hydroxypropyl)-5-methyl-phenyl]amino]methyl]-2-(3-morpholin-4-ylpropylamino)benzimidazol-1-yl]methyl]-6-methyl-pyridin-3-ol

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES_CANONICAL	CACTVS	3.352	Cc1ccc(CCCO)c(NCc2ccc3nc(NCCCN4CCOCC4)n(Cc5nc(C)ccc5O)c3c2)c1
SMILES	CACTVS	3.352	Cc1ccc(CCCO)c(NCc2ccc3nc(NCCCN4CCOCC4)n(Cc5nc(C)ccc5O)c3c2)c1
SMILES_CANONICAL	OpenEye OEToolkits	1.7.0	Cc1ccc(c(c1)NCc2ccc3c(c2)n(c(n3)NCCCN4CCOCC4)Cc5c(ccc(n5)C)O)CCCO
SMILES	OpenEye OEToolkits	1.7.0	Cc1ccc(c(c1)NCc2ccc3c(c2)n(c(n3)NCCCN4CCOCC4)Cc5c(ccc(n5)C)O)CCCO
InChI	InChI	1.03	InChI=1S/C32H42N6O3/c1-23-6-9-26(5-3-16-39)28(19-23)34-21-25-8-10-27-30(20-25)38(22-29-31(40)11-7-24(2)35-29)32(36-27)33-12-4-13-37-14-17-41-18-15-37/h6-11,19-20,34,39-40H,3-5,12-18,21-22H2,1-2H3,(H,33,36)
InChIKey	InChI	1.03	DKORMNNYNRPTBJ-UHFFFAOYSA-N

Chemical Database Mapping

Database	Reference ID
ChEMBL	CHEMBL408963
PubChem	11249932
ZINC	ZINC000029134397
SureChEMBL	SCHEMBL540713