Structural Complex
Chemical ID: G1M
IUPAC Name: 2'-deoxy-5'-O-[(R)-hydroxy({(S)-hydroxy[(1R)-1-phosphonoethyl]phosphoryl}oxy)phosphoryl]guanosine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula: C12 H20 N5 O12 P3
Molecular weight: 519.235
Hydrogen Bond Acceptor: 16
Hydrogen Bond Donor: 7
Rotatable Bonds: 15
Heavy Atoms: 32
Systematic name
Program Version Descriptor
ACDLabs 11.02 2'-deoxy-5'-O-[(R)-hydroxy({(S)-hydroxy[(1R)-1-phosphonoethyl]phosphoryl}oxy)phosphoryl]guanosine
OpenEye OEToolkits 1.6.1 [(1R)-1-[[[(2R,3S,5R)-5-(2-azanyl-6-oxo-1H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]ethyl]phosphonic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 11.02 O=P(O)(O)C(C)P(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)CC3O
SMILES_CANONICAL CACTVS 3.352 C[C@H]([P](O)(O)=O)[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H](C[C@@H]1O)n2cnc3C(=O)NC(=Nc23)N
SMILES CACTVS 3.352 C[CH]([P](O)(O)=O)[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH](C[CH]1O)n2cnc3C(=O)NC(=Nc23)N
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 C[C@@H]([P@](=O)(O)O[P@](=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)n2cnc3c2N=C(NC3=O)N)O)P(=O)(O)O
SMILES OpenEye OEToolkits 1.7.0 CC(P(=O)(O)O)P(=O)(O)OP(=O)(O)OCC1C(CC(O1)n2cnc3c2N=C(NC3=O)N)O
InChI InChI 1.03 InChI=1S/C12H20N5O12P3/c1-5(30(20,21)22)31(23,24)29-32(25,26)27-3-7-6(18)2-8(28-7)17-4-14-9-10(17)15-12(13)16-11(9)19/h4-8,18H,2-3H2,1H3,(H,23,24)(H,25,26)(H2,20,21,22)(H3,13,15,16,19)/t5-,6+,7-,8-/m1/s1
InChIKey InChI 1.03 KAYWITWNVLLSPS-ULAWRXDQSA-N
Chemical Database Mapping
Database Reference ID
PubChem 135566491
ZINC ZINC000058660833