Structural Complex
Chemical ID: N8M
IUPAC Name: 5'-deoxy-5'-(dimethylamino)-8-methyladenosine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1
InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula: C13 H20 N6 O3
Molecular weight: 308.336
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 3
Rotatable Bonds: 9
Heavy Atoms: 22
Systematic name
Program Version Descriptor
ACDLabs 10.04 5'-deoxy-5'-(dimethylamino)-8-methyladenosine
OpenEye OEToolkits 1.5.0 (2R,3R,4S,5R)-2-(6-amino-8-methyl-purin-9-yl)-5-(dimethylaminomethyl)oxolane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 n2c1c(ncnc1n(c2C)C3OC(C(O)C3O)CN(C)C)N
SMILES_CANONICAL CACTVS 3.341 CN(C)C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2c(C)nc3c(N)ncnc23
SMILES CACTVS 3.341 CN(C)C[CH]1O[CH]([CH](O)[CH]1O)n2c(C)nc3c(N)ncnc23
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 Cc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)CN(C)C)O)O)N
SMILES OpenEye OEToolkits 1.5.0 Cc1nc2c(ncnc2n1C3C(C(C(O3)CN(C)C)O)O)N
InChI InChI 1.03 InChI=1S/C13H20N6O3/c1-6-17-8-11(14)15-5-16-12(8)19(6)13-10(21)9(20)7(22-13)4-18(2)3/h5,7,9-10,13,20-21H,4H2,1-3H3,(H2,14,15,16)/t7-,9-,10-,13-/m1/s1
InChIKey InChI 1.03 BDRUNDKEQQVJJG-QYVSTXNMSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL516214
PubChem 25231308
ZINC ZINC000040406101
SureChEMBL SCHEMBL955366