Structural Complex
Chemical ID: H2U
IUPAC Name: 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CCN([C@H]2CCCO2)C(=O)N1
InChI: InChI=1S/C8H12N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h7H,1-5H2,(H,9,11,12)/t7-/m1/s1
InChI Key: ZAERJFADDUTCMT-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H15 N2 O9 P
Molecular weight: 326.197
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 5
Rotatable Bonds: 8
Heavy Atoms: 21
Systematic name
Program Version Descriptor
ACDLabs 10.04 5'-uridylic acid
OpenEye OEToolkits 1.5.0 [(2R,3S,4R,5R)-5-(2,4-dioxo-1,3-diazinan-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1N(CCC(=O)N1)C2OC(C(O)C2O)COP(=O)(O)O
SMILES_CANONICAL CACTVS 3.341 O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2CCC(=O)NC2=O
SMILES CACTVS 3.341 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2CCC(=O)NC2=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
SMILES OpenEye OEToolkits 1.5.0 C1CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)O)O)O
InChI InChI 1.03 InChI=1S/C9H15N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h4,6-8,13-14H,1-3H2,(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey InChI 1.03 NBWDKGJHOHJBRJ-XVFCMESISA-N
Chemical Database Mapping
Database Reference ID
PubChem 440416
ChEBI 74673
SureChEMBL SCHEMBL11178912