Structural Complex
Chemical ID: C6B
IUPAC Name: [(2S,3S,4R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@@H]1CCCO1
InChI: InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m0/s1
InChI Key: AKXKPKRAUWTVBW-ZETCQYMHSA-N
Physiochemical Descriptor:
Formula: C9 H14 N3 O8 P
Molecular weight: 323.197
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 5
Rotatable Bonds: 9
Heavy Atoms: 21
Systematic name
Program Version Descriptor
ACDLabs 10.04 4-amino-1-(3-O-phosphono-beta-L-lyxofuranosyl)pyrimidin-2(1H)-one
OpenEye OEToolkits 1.5.0 [(2S,3S,4R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1N=C(N)C=CN1C2OC(C(OP(=O)(O)O)C2O)CO
SMILES_CANONICAL CACTVS 3.341 NC1=NC(=O)N(C=C1)[C@H]2O[C@@H](CO)[C@@H](O[P](O)(O)=O)[C@H]2O
SMILES CACTVS 3.341 NC1=NC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O[P](O)(O)=O)[CH]2O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1=CN(C(=O)N=C1N)[C@@H]2[C@@H]([C@@H]([C@@H](O2)CO)OP(=O)(O)O)O
SMILES OpenEye OEToolkits 1.5.0 C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)OP(=O)(O)O)O
InChI InChI 1.03 InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-6(14)7(4(3-13)19-8)20-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6+,7+,8-/m0/s1
InChIKey InChI 1.03 UOOOPKANIPLQPU-IHBLQFBFSA-N
Chemical Database Mapping
Database Reference ID
PubChem 40488593
ZINC ZINC000004535605