Structural Complex
Chemical ID: T3S
IUPAC Name: 5'-deoxy-5'-piperidin-1-ylthymidine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2CC[C@@H](CN3CCCCC3)O2)c(=O)[nH]1
InChI: InChI=1S/C14H21N3O3/c18-12-6-9-17(14(19)15-12)13-5-4-11(20-13)10-16-7-2-1-3-8-16/h6,9,11,13H,1-5,7-8,10H2,(H,15,18,19)/t11-,13+/m0/s1
InChI Key: HJBRCQZLAYGKAX-WCQYABFASA-N
Physiochemical Descriptor:
Formula: C15 H23 N3 O4
Molecular weight: 309.361
Hydrogen Bond Acceptor: 6
Hydrogen Bond Donor: 2
Rotatable Bonds: 5
Heavy Atoms: 22
Systematic name
Program Version Descriptor
ACDLabs 10.04 5'-deoxy-5'-piperidin-1-ylthymidine
OpenEye OEToolkits 1.5.0 1-[(2R,4S,5R)-4-hydroxy-5-(piperidin-1-ylmethyl)oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NC(=O)N(C=C1C)C2OC(C(O)C2)CN3CCCCC3
SMILES_CANONICAL CACTVS 3.341 CC1=CN([C@H]2C[C@H](O)[C@@H](CN3CCCCC3)O2)C(=O)NC1=O
SMILES CACTVS 3.341 CC1=CN([CH]2C[CH](O)[CH](CN3CCCCC3)O2)C(=O)NC1=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CN3CCCCC3)O
SMILES OpenEye OEToolkits 1.5.0 CC1=CN(C(=O)NC1=O)C2CC(C(O2)CN3CCCCC3)O
InChI InChI 1.03 InChI=1S/C15H23N3O4/c1-10-8-18(15(21)16-14(10)20)13-7-11(19)12(22-13)9-17-5-3-2-4-6-17/h8,11-13,19H,2-7,9H2,1H3,(H,16,20,21)/t11-,12+,13+/m0/s1
InChIKey InChI 1.03 GMOUOGHZJCSNOZ-YNEHKIRRSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB08596
ChEMBL CHEMBL460910
PubChem 25147494
ZINC ZINC000040864131