Structural Complex
Chemical ID: PYI
IUPAC Name: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM
Formal Charge: 1
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1cc[n+](Cc2cncnc2)cc1
InChI: InChI=1S/C10H10N3/c1-2-4-13(5-3-1)8-10-6-11-9-12-7-10/h1-7,9H,8H2/q+1
InChI Key: VMHCEVFBSUAPPD-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C14 H21 N4 O7 P2
Molecular weight: 419.287
Hydrogen Bond Acceptor: 10
Hydrogen Bond Donor: 4
Rotatable Bonds: 14
Heavy Atoms: 27
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-methylpyridinium
OpenEye OEToolkits 1.5.0 2-[1-[(4-amino-2-methyl-pyrimidin-5-yl)methyl]-2-methyl-pyridin-1-ium-3-yl]ethyl phosphono hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=P(O)(O)OP(=O)(O)OCCc1ccc[n+](c1C)Cc2cnc(nc2N)C
SMILES_CANONICAL CACTVS 3.341 Cc1ncc(C[n+]2cccc(CCO[P@](O)(=O)O[P](O)(O)=O)c2C)c(N)n1
SMILES CACTVS 3.341 Cc1ncc(C[n+]2cccc(CCO[P](O)(=O)O[P](O)(O)=O)c2C)c(N)n1
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 Cc1c(ccc[n+]1Cc2cnc(nc2N)C)CCO[P@@](=O)(O)OP(=O)(O)O
SMILES OpenEye OEToolkits 1.5.0 Cc1c(ccc[n+]1Cc2cnc(nc2N)C)CCOP(=O)(O)OP(=O)(O)O
InChI InChI 1.03 InChI=1S/C14H20N4O7P2/c1-10-12(5-7-24-27(22,23)25-26(19,20)21)4-3-6-18(10)9-13-8-16-11(2)17-14(13)15/h3-4,6,8H,5,7,9H2,1-2H3,(H4-,15,16,17,19,20,21,22,23)/p+1
InChIKey InChI 1.03 ZHKSTKOYQKNDSJ-UHFFFAOYSA-O
Chemical Database Mapping
Database Reference ID
DrugBank DB04768
PubChem 5327150
ChEBI 45395
ZINC ZINC000012504503