Structural Complex
Chemical ID: HT2
IUPAC Name: 5-AMIDINO-2-[2-(4-AMIDINOPHENYL)-5-BENZIMIDAZOLYL]BENZIMIDAZOLE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc(-c2nc3ccc(-c4nc5ccccc5[nH]4)cc3[nH]2)cc1
InChI: InChI=1S/C20H14N4/c1-2-6-13(7-3-1)19-23-17-11-10-14(12-18(17)24-19)20-21-15-8-4-5-9-16(15)22-20/h1-12H,(H,21,22)(H,23,24)
InChI Key: PJZLCHZKTCVAOI-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C22 H18 N8
Molecular weight: 394.432
Hydrogen Bond Acceptor: 4
Hydrogen Bond Donor: 6
Rotatable Bonds: 4
Heavy Atoms: 30
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-(4-carbamimidoylphenyl)-1H,3'H-2,5'-bibenzimidazole-6-carboximidamide
OpenEye OEToolkits 1.5.0 2-[2-(4-carbamimidoylphenyl)-3H-benzimidazol-5-yl]-3H-benzimidazole-5-carboximidamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 [N@H]=C(N)c1ccc(cc1)c5nc4ccc(c3nc2ccc(cc2n3)C(=[N@H])N)cc4n5
SMILES_CANONICAL CACTVS 3.341 NC(=N)c1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C(N)=N
SMILES CACTVS 3.341 NC(=N)c1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C(N)=N
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cc(ccc1c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C(=N)N)C(=N)N
SMILES OpenEye OEToolkits 1.5.0 c1cc(ccc1c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C(=N)N)C(=N)N
InChI InChI 1.03 InChI=1S/C22H18N8/c23-19(24)11-1-3-12(4-2-11)21-27-16-8-6-14(10-18(16)29-21)22-28-15-7-5-13(20(25)26)9-17(15)30-22/h1-10H,(H3,23,24)(H3,25,26)(H,27,29)(H,28,30)
InChIKey InChI 1.03 YEJMAZMIHIFTFO-UHFFFAOYSA-N
Chemical Database Mapping
Database Reference ID
PubChem 449422
ZINC ZINC000005974176
SureChEMBL SCHEMBL12348362