Structural Complex
Chemical ID: RPT
IUPAC Name: RIFAPENTINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1/C=C\C=C\CCCCCCCC/C=C/OC2Oc3ccc4cc(c(/C=N/N5CCN(C6CCCC6)CC5)cc4c3C2=O)N1
InChI: InChI=1S/C37H46N4O4/c42-34-17-11-9-7-5-3-1-2-4-6-8-10-14-24-44-37-36(43)35-31-25-29(32(39-34)26-28(31)18-19-33(35)45-37)27-38-41-22-20-40(21-23-41)30-15-12-13-16-30/h7,9,11,14,17-19,24-27,30,37H,1-6,8,10,12-13,15-16,20-23H2,(H,39,42)/b9-7+,17-11-,24-14+,38-27+
InChI Key: JNPUHXBOQAJMRA-SJKKBWLJSA-N
Physiochemical Descriptor:
Formula: C47 H64 N4 O12
Molecular weight: 877.031
Hydrogen Bond Acceptor: 15
Hydrogen Bond Donor: 6
Rotatable Bonds: 19
Heavy Atoms: 63
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-{(E)-[(4-cyclopentylpiperazin-1-yl)imino]methyl}-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C5c6c3c(O)c(\C=N\N2CCN(C1CCCC1)CC2)c4c(O)c3c(O)c(c6OC5(OC=CC(OC)C(C(OC(=O)C)C(C)C(O)C(C)C(O)C(C=CC=C(C(=O)N4)C)C)C)C)C
SMILES_CANONICAL CACTVS 3.341 CO[C@H]1\C=C\O[C@@]2(C)Oc3c(C)c(O)c4c(O)c(NC(=O)\C(=C/C=C/[C@H](C)[C@H](O)[C@@H](C)[C@@H](O)[C@@H](C)[C@H](OC(C)=O)[C@@H]1C)C)c(\C=N\N5CCN(CC5)C6CCCC6)c(O)c4c3C2=O
SMILES CACTVS 3.341 CO[CH]1C=CO[C]2(C)Oc3c(C)c(O)c4c(O)c(NC(=O)C(=CC=C[CH](C)[CH](O)[CH](C)[CH](O)[CH](C)[CH](OC(C)=O)[CH]1C)C)c(C=NN5CCN(CC5)C6CCCC6)c(O)c4c3C2=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 Cc1c(c2c3c4c1O[C@@](C4=O)(O\C=C\[C@@H]([C@H]([C@H]([C@@H]([C@@H]([C@@H]([C@H]([C@H](\C=C\C=C(/C(=O)Nc(c2O)c(c3O)\C=N\N5CCN(CC5)C6CCCC6)\C)C)O)C)O)C)OC(=O)C)C)OC)C)O
SMILES OpenEye OEToolkits 1.5.0 Cc1c(c2c3c4c1OC(C4=O)(OC=CC(C(C(C(C(C(C(C(C=CC=C(C(=O)Nc(c2O)c(c3O)C=NN5CCN(CC5)C6CCCC6)C)C)O)C)O)C)OC(=O)C)C)OC)C)O
InChI InChI 1.03 InChI=1S/C47H64N4O12/c1-24-13-12-14-25(2)46(59)49-37-32(23-48-51-20-18-50(19-21-51)31-15-10-11-16-31)41(56)34-35(42(37)57)40(55)29(6)44-36(34)45(58)47(8,63-44)61-22-17-33(60-9)26(3)43(62-30(7)52)28(5)39(54)27(4)38(24)53/h12-14,17,22-24,26-28,31,33,38-39,43,53-57H,10-11,15-16,18-21H2,1-9H3,(H,49,59)/b13-12+,22-17+,25-14-,48-23+/t24-,26+,27+,28+,33-,38-,39+,43+,47-/m0/s1
InChIKey InChI 1.03 WDZCUPBHRAEYDL-GZAUEHORSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB01201
ChEMBL CHEMBL1660
PubChem 135403821
ChEBI 45304
ZINC ZINC000169621228
SureChEMBL SCHEMBL41590