Structural Complex
Chemical ID: IM4
IUPAC Name: (2E)-1-[(6-chloropyridin-3-yl)methyl]-N-nitroimidazolidin-2-imine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: N=C1NCCN1Cc1cccnc1
InChI: InChI=1S/C9H12N4/c10-9-12-4-5-13(9)7-8-2-1-3-11-6-8/h1-3,6H,4-5,7H2,(H2,10,12)
InChI Key: ZCDGHEWSWOTSGZ-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C9 H10 Cl N5 O2
Molecular weight: 255.661
Hydrogen Bond Acceptor: 3
Hydrogen Bond Donor: 1
Rotatable Bonds: 3
Heavy Atoms: 17
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2E)-1-[(6-chloropyridin-3-yl)methyl]-N-nitroimidazolidin-2-imine
OpenEye OEToolkits 1.5.0 (NE)-N-[1-[(6-chloropyridin-3-yl)methyl]imidazolidin-2-ylidene]nitramide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 [O-][N+](=O)/N=C1\NCCN1Cc2cnc(Cl)cc2
SMILES_CANONICAL CACTVS 3.341 [O-][N+](=O)\N=C\1NCCN\1Cc2ccc(Cl)nc2
SMILES CACTVS 3.341 [O-][N+](=O)N=C1NCCN1Cc2ccc(Cl)nc2
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cc(ncc1CN\2CCN/C2=N\[N+](=O)[O-])Cl
SMILES OpenEye OEToolkits 1.5.0 c1cc(ncc1CN2CCNC2=N[N+](=O)[O-])Cl
InChI InChI 1.03 InChI=1S/C9H10ClN5O2/c10-8-2-1-7(5-12-8)6-14-4-3-11-9(14)13-15(16)17/h1-2,5H,3-4,6H2,(H,11,13)
InChIKey InChI 1.03 YWTYJOPNNQFBPC-UHFFFAOYSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB11421
ChEMBL CHEMBL406819
PubChem 86287518,135527764,135541675,86418
ChEBI 39168,39169,5870
ZINC ZINC000004474604
SureChEMBL SCHEMBL22278
HMDB HMDB0040292