Structural Complex
Chemical ID: XBK
IUPAC Name: 4,5-DE-EPOXYPIMARICIN
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1/C=C/C=C/CCCC2CCC[C@H](C[C@@H](O[C@H]3CCCCO3)/C=C/C=C/C=C/C=C/CCO1)O2
InChI: InChI=1S/C30H42O5/c31-29-21-12-8-5-7-10-17-26-19-16-20-27(34-26)25-28(35-30-22-13-15-24-33-30)18-11-6-3-1-2-4-9-14-23-32-29/h1-6,8-9,11-12,18,21,26-28,30H,7,10,13-17,19-20,22-25H2/b2-1+,6-3+,8-5+,9-4+,18-11+,21-12+/t26?,27-,28+,30+/m1/s1
InChI Key: MNUPNNGMLFVYHU-TYKSXPTESA-N
Physiochemical Descriptor:
Formula: C33 H47 N O12
Molecular weight: 649.726
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 7
Rotatable Bonds: 11
Heavy Atoms: 46
Systematic name
Program Version Descriptor
ACDLabs 10.04 (1R,3S,5E,7E,11R,13E,15E,17E,19E,21R,23S,24R,25S)-21-[(3-amino-3,6-dideoxy-beta-D-mannopyranosyl)oxy]-1,3,25-trihydroxy-11-methyl-9-oxo-10,27-dioxabicyclo[21.3.1]heptacosa-5,7,13,15,17,19-hexaene-24-carboxylic acid
OpenEye OEToolkits 1.6.1 (1S,3R,4E,6E,8E,10E,13R,16E,18E,21S,23R,25S,26R)-3-[(2R,3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyl-oxan-2-yl]oxy-21,23,25-trihydroxy-13-methyl-15-oxo-14,27-dioxabicyclo[21.3.1]heptacosa-4,6,8,10,16,18-hexaene-26-carboxylic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(O)C1C(O)CC3(O)OC1CC(OC2OC(C)C(O)C(N)C2O)C=CC=CC=CC=CCC(OC(=O)C=CC=CCC(O)C3)C
SMILES_CANONICAL CACTVS 3.352 C[C@@H]1C/C=C/C=C/C=C/C=C/[C@@H](C[C@@H]2O[C@](O)(C[C@@H](O)C/C=C/C=C/C(=O)O1)C[C@H](O)[C@H]2C(O)=O)O[C@@H]3O[C@H](C)[C@@H](O)[C@H](N)[C@@H]3O
SMILES CACTVS 3.352 C[CH]1CC=CC=CC=CC=C[CH](C[CH]2O[C](O)(C[CH](O)CC=CC=CC(=O)O1)C[CH](O)[CH]2C(O)=O)O[CH]3O[CH](C)[CH](O)[CH](N)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.6.1 C[C@@H]1C\C=C\C=C\C=C\C=C\[C@@H](C[C@H]2[C@@H]([C@H](C[C@](O2)(C[C@H](C\C=C\C=C\C(=O)O1)O)O)O)C(=O)O)O[C@H]3[C@H]([C@H]([C@@H]([C@H](O3)C)O)N)O
SMILES OpenEye OEToolkits 1.6.1 CC1CC=CC=CC=CC=CC(CC2C(C(CC(O2)(CC(CC=CC=CC(=O)O1)O)O)O)C(=O)O)OC3C(C(C(C(O3)C)O)N)O
InChI InChI 1.03 InChI=1S/C33H47NO12/c1-20-13-9-6-4-3-5-7-11-15-23(45-32-30(39)28(34)29(38)21(2)44-32)17-25-27(31(40)41)24(36)19-33(42,46-25)18-22(35)14-10-8-12-16-26(37)43-20/h3-12,15-16,20-25,27-30,32,35-36,38-39,42H,13-14,17-19,34H2,1-2H3,(H,40,41)/b4-3+,7-5+,9-6+,10-8+,15-11+,16-12+/t20-,21-,22+,23+,24+,25+,27-,28+,29-,30+,32+,33-/m1/s1
InChIKey InChI 1.03 SQKHCBHOKICFHY-FNNGFRNWSA-N
Chemical Database Mapping
Database Reference ID
PubChem 49867845
ZINC ZINC000098209606