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Summary
Structure Feature
Experiment
Ligands & Environment
2X9G
pdb_00002x9g
10.2210/pdb2x9g/pdb
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FASTA
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Structure Factors
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ACT
LYA
NAP
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
LYA
IUPAC Name:
2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID
Formal Charge:
0
Type:
NON-POLYMER
Substructure
Substruture Type:
MurckoScaffold
SMILES:
O=c1nc[nH]c2[nH]cc(CCc3ccccc3)c12
InChI:
InChI=1S/C14H13N3O/c18-14-12-11(8-15-13(12)16-9-17-14)7-6-10-4-2-1-3-5-10/h1-5,8-9H,6-7H2,(H2,15,16,17,18)
InChI Key:
GYMUFHDRARXLAZ-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula:
C20 H21 N5 O6
Molecular weight:
427.411
Hydrogen Bond Acceptor:
8
Hydrogen Bond Donor:
6
Rotatable Bonds:
10
Heavy Atoms:
31
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
N-({4-[2-(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]phenyl}carbonyl)-L-glutamic acid
OpenEye OEToolkits
1.5.0
(2S)-2-[[4-[2-(2-amino-4-oxo-1,7-dihydropyrrolo[4,5-e]pyrimidin-5-yl)ethyl]phenyl]carbonylamino]pentanedioic acid
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
O=C(O)C(NC(=O)c1ccc(cc1)CCc2cnc3NC(=NC(=O)c23)N)CCC(=O)O
SMILES_CANONICAL
CACTVS
3.341
NC1=NC(=O)c2c(CCc3ccc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)c[nH]c2N1
SMILES
CACTVS
3.341
NC1=NC(=O)c2c(CCc3ccc(cc3)C(=O)N[CH](CCC(O)=O)C(O)=O)c[nH]c2N1
SMILES_CANONICAL
OpenEye OEToolkits
1.5.0
c1cc(ccc1CCc2c[nH]c3c2C(=O)N=C(N3)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O
SMILES
OpenEye OEToolkits
1.5.0
c1cc(ccc1CCc2c[nH]c3c2C(=O)N=C(N3)N)C(=O)NC(CCC(=O)O)C(=O)O
InChI
InChI
1.03
InChI=1S/C20H21N5O6/c21-20-24-16-15(18(29)25-20)12(9-22-16)6-3-10-1-4-11(5-2-10)17(28)23-13(19(30)31)7-8-14(26)27/h1-2,4-5,9,13H,3,6-8H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29)/t13-/m0/s1
InChIKey
InChI
1.03
WBXPDJSOTKVWSJ-ZDUSSCGKSA-N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB00642
ChEMBL
CHEMBL225072
PubChem
135410875
ChEBI
63616
ZINC
ZINC000001540998
SureChEMBL
SCHEMBL7968
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