Structural Complex
Chemical ID: DCZ
IUPAC Name: 2'-DEOXYCYTIDINE
Formal Charge: 0
Type: DNA OH 5 prime terminus
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@H]1CCCO1
InChI: InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1
InChI Key: AKXKPKRAUWTVBW-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H13 N3 O4
Molecular weight: 227.217
Hydrogen Bond Acceptor: 7
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 16
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-deoxycytidine
OpenEye OEToolkits 1.5.0 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1N=C(N)C=CN1C2OC(C(O)C2)CO
SMILES_CANONICAL CACTVS 3.341 NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CO)O2
SMILES CACTVS 3.341 NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO)O2
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)CO)O
SMILES OpenEye OEToolkits 1.5.0 C1C(C(OC1N2C=CC(=NC2=O)N)CO)O
InChI InChI 1.03 InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1
InChIKey InChI 1.03 CKTSBUTUHBMZGZ-SHYZEUOFSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB02594
ChEMBL CHEMBL66115
PubChem 13711
ChEBI 15698
ZINC ZINC000018286013
SureChEMBL SCHEMBL23178
HMDB HMDB0000014