Structural Complex
Chemical ID: GEO
IUPAC Name: GEMCITABINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@H]1CCCO1
InChI: InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1
InChI Key: AKXKPKRAUWTVBW-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H11 F2 N3 O4
Molecular weight: 263.198
Hydrogen Bond Acceptor: 7
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-deoxy-2',2'-difluorocytidine
OpenEye OEToolkits 1.5.0 4-amino-1-[(2R,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1N=C(N)C=CN1C2OC(C(O)C2(F)F)CO
SMILES_CANONICAL CACTVS 3.341 NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO)[C@@H](O)C2(F)F
SMILES CACTVS 3.341 NC1=NC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O)C2(F)F
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1=CN(C(=O)N=C1N)[C@H]2C([C@@H]([C@H](O2)CO)O)(F)F
SMILES OpenEye OEToolkits 1.5.0 C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)(F)F
InChI InChI 1.03 InChI=1S/C9H11F2N3O4/c10-9(11)6(16)4(3-15)18-7(9)14-2-1-5(12)13-8(14)17/h1-2,4,6-7,15-16H,3H2,(H2,12,13,17)/t4-,6-,7-/m1/s1
InChIKey InChI 1.03 SDUQYLNIPVEERB-QPPQHZFASA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB00441
ChEMBL CHEMBL888
PubChem 60750
ChEBI 175901
ZINC ZINC000018279854
SureChEMBL SCHEMBL4295
HMDB HMDB0014584