Structural Complex
Chemical ID: PRD_000874
IUPAC Name: PawS Derived Peptide 4 (PDP-4)
Formal Charge: ?
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC(=O)CNC(=O)CNC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CSSC[C@H](NC(=O)CNC(=O)CN1)C(=O)N[C@@H](Cc1ccccc1)C(=O)NCC(=O)NCC(=O)N[C@@H](Cc1ccccc1)C(=O)N2
InChI: InChI=1S/C47H56N12O12S2/c60-36-19-48-37(61)20-50-39(63)22-53-44(68)32(17-29-12-6-2-7-13-29)58-47(71)35-27-73-72-26-34(56-42(66)25-51-38(62)21-49-36)46(70)57-31(16-28-10-4-1-5-11-28)43(67)54-23-40(64)52-24-41(65)55-33(45(69)59-35)18-30-14-8-3-9-15-30/h1-15,31-35H,16-27H2,(H,48,61)(H,49,60)(H,50,63)(H,51,62)(H,52,64)(H,53,68)(H,54,67)(H,55,65)(H,56,66)(H,57,70)(H,58,71)(H,59,69)/t31-,32-,33-,34-,35-/m0/s1
InChI Key: ZJIJMJZZNOFRKZ-ZZTWKDBPSA-N
Physiochemical Descriptor:
Formula: C59 H82 N18 O15 S2
Molecular weight: 1347.524
Hydrogen Bond Acceptor: 17
Hydrogen Bond Donor: 20
Rotatable Bonds: 19
Heavy Atoms: 94
Systematic name
Program Version Descriptor
ACDLabs 12.01 {[(1R,4S,10S,13S,16S,19S,22R,25S,28S,34S)-19,25,34-tribenzyl-10-(carboxymethyl)-4-(hydroxymethyl)-28-methyl-3,6,9,12,15,18,21,24,27,30,33,36-dodecaoxo-38,39-dithia-2,5,8,11,14,17,20,23,26,29,32,35-dodecaazabicyclo[20.14.4]tetracontane-13,16-diyl]bis(propane-3,1-diylimino)}bis(aminomethaniminium)
OpenEye OEToolkits 1.7.6 [[3-[(1R,4S,7S,10S,13S,19S,22R,25S,31S,34S)-7-[3-[[azaniumylidene(azanyl)methyl]amino]propyl]-19-(hydroxymethyl)-13-(2-hydroxy-2-oxoethyl)-31-methyl-2,5,8,11,14,17,20,23,26,29,32,35-dodecakis(oxidanylidene)-4,25,34-tris(phenylmethyl)-38,39-dithia-3,6,9,12,15,18,21,24,27,30,33,36-dodecazabicyclo[20.14.4]tetracontan-10-yl]propylamino]-azanyl-methylidene]azanium
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)CC1NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C2NC(=O)C(NC(=O)C(NC(=O)CNC(=O)C(NC(=O)C(NC(=O)C(NC(=O)CNC1=O)CO)CSSC2)Cc3ccccc3)C)Cc4ccccc4)Cc5ccccc5)CCCNC(=[NH2+])\N)CCCNC(=[NH2+])\N
InChI InChI 1.03 InChI=1S/C59H80N18O15S2/c1-32-48(83)72-39(24-34-15-7-3-8-16-34)54(89)76-43-30-93-94-31-44(56(91)73-38(23-33-13-5-2-6-14-33)49(84)66-27-45(79)68-32)77-55(90)42(29-78)69-46(80)28-67-50(85)41(26-47(81)82)75-52(87)37(20-12-22-65-59(62)63)70-51(86)36(19-11-21-64-58(60)61)71-53(88)40(74-57(43)92)25-35-17-9-4-10-18-35/h2-10,13-18,32,36-44,78H,11-12,19-31H2,1H3,(H,66,84)(H,67,85)(H,68,79)(H,69,80)(H,70,86)(H,71,88)(H,72,83)(H,73,91)(H,74,92)(H,75,87)(H,76,89)(H,77,90)(H,81,82)(H4,60,61,64)(H4,62,63,65)/p+2/t32-,36-,37-,38-,39-,40-,41-,42-,43-,44-/m0/s1
InChIKey InChI 1.03 NSMJGKZLXVJUIQ-YFUSJSQUSA-P
SMILES_CANONICAL CACTVS 3.370 C[C@@H]1NC(=O)CNC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]3CSSC[C@H](NC(=O)[C@H](Cc4ccccc4)NC1=O)C(=O)N[C@@H](Cc5ccccc5)C(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)N[C@@H](CC(O)=O)C(=O)NCC(=O)N[C@@H](CO)C(=O)N3
SMILES CACTVS 3.370 C[CH]1NC(=O)CNC(=O)[CH](Cc2ccccc2)NC(=O)[CH]3CSSC[CH](NC(=O)[CH](Cc4ccccc4)NC1=O)C(=O)N[CH](Cc5ccccc5)C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH](CC(O)=O)C(=O)NCC(=O)N[CH](CO)C(=O)N3
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 C[C@H]1C(=O)N[C@H](C(=O)N[C@H]2CSSC[C@@H](C(=O)N[C@H](C(=O)NCC(=O)N1)Cc3ccccc3)NC(=O)[C@@H](NC(=O)CNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC2=O)Cc4ccccc4)CCCNC(=[NH2+])N)CCCNC(=[NH2+])N)CC(=O)O)CO)Cc5ccccc5
SMILES OpenEye OEToolkits 1.7.6 CC1C(=O)NC(C(=O)NC2CSSCC(C(=O)NC(C(=O)NCC(=O)N1)Cc3ccccc3)NC(=O)C(NC(=O)CNC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C(NC2=O)Cc4ccccc4)CCCNC(=[NH2+])N)CCCNC(=[NH2+])N)CC(=O)O)CO)Cc5ccccc5
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