Structural Complex
Chemical ID: PRD_000723
IUPAC Name: PYOVERDIN C-E Fe Complex
Formal Charge: ?
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC(=O)CNC(=O)[C@@H]2CCNc3ccc4cc5c(cc4[n+]32)[O][Fe+3]2([O]NCCC[C@H](NC(=O)CN1)C(=O)N[C@H]1CCCC[NH2+]C(=O)CNC(=O)CNC(=O)[C@H](CCCN[O]2)NC1=O)[O]5
InChI: InChI=1S/C39H55N13O13.Fe/c53-28-15-22-8-9-30-40-14-10-26(52(30)27(22)16-29(28)54)39(63)46-20-34(58)43-18-32(56)44-21-35(59)49-24(7-4-13-48-65)37(61)51-25-5-1-2-11-41-31(55)17-42-33(57)19-45-36(60)23(50-38(25)62)6-3-12-47-64;/h8-9,15-16,23-26,47-48H,1-7,10-14,17-21H2,(H11,40,41,42,43,44,45,46,49,50,51,53,54,55,56,57,58,59,60,61,62,63);/q-2;+7/t23-,24-,25-,26-;/m0./s1
InChI Key: ZWLILSJINKLZOO-KRZJFFIJSA-N
Physiochemical Descriptor:
Formula: C55 H82 Fe N17 O22
Molecular weight: 1389.185
Hydrogen Bond Acceptor: 23
Hydrogen Bond Donor: 19
Rotatable Bonds: 18
Heavy Atoms: 95
Systematic name
Program Version Descriptor
ACDLabs 12.01 [N-{[(1R)-5-[(3-carboxypropanoyl)amino]-8,9-di(hydroxy-kappaO)-1,2,3,4-tetrahydropyrimido[1,2-a]quinolin-11-ium-1-yl]carbonyl}-D-seryl-N~5~-[amino(iminio)methyl]-L-ornithyl-D-seryl-N~5~-formyl-kappaO-N-{(3R,6S,9S,12R)-9-{3-[(formyl-kappaO)(hydroxy-kappaO)amino]propyl}-6-[(1R)-1-hydroxyethyl]-3-[(1S)-1-hydroxyethyl]-2,5,8,11-tetraoxo-4,7,10-triaza-1-azoniacyclohexadecan-12-yl}-N~5~-hydroxy-kappaO-L-ornithinamidato(4-)]iron(6+)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)CCC(=O)Nc3cc9c2cc8o[Fe+3]615(ocn(o1)CCCC7C(=O)NC(C(=O)NC(C(=O)[NH2+]CCCCC(NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C4[n+]2c3NCC4)CO)CCCNC(=[NH2+])\N)CO)CCCn(o5)co6)C(=O)N7)C(O)C)C(O)C)oc8c9
InChI InChI 1.03 InChI=1S/C55H81N17O22.Fe/c1-27(77)43-53(91)59-15-4-3-8-30(46(84)63-33(11-7-19-71(94)26-76)49(87)68-44(28(2)78)54(92)69-43)62-47(85)32(10-6-18-70(93)25-75)65-50(88)35(23-73)66-48(86)31(9-5-16-60-55(56)57)64-51(89)36(24-74)67-52(90)37-14-17-58-45-34(61-41(81)12-13-42(82)83)20-29-21-39(79)40(80)22-38(29)72(37)45;/h20-22,25-28,30-33,35-37,43-44,73-74,77-78H,3-19,23-24H2,1-2H3,(H17,56,57,58,59,60,61,62,63,64,65,66,67,68,69,79,80,81,82,83,84,85,86,87,88,89,90,91,92);/q-2;+7/p+1
InChIKey InChI 1.03 REEJEWYDVJJOLS-UHFFFAOYSA-O
SMILES_CANONICAL CACTVS 3.370 C[C@@H](O)[C@@H]1NC(=O)[C@@H]2CCC[N@@]3O[Fe+3]456(|O=C[N@](CCC[C@H](NC(=O)[C@@H](CO)NC(=O)[C@H](CCCNC(N)=[NH2+])NC(=O)[C@@H](CO)NC(=O)[C@@H]7CCNc8c(NC(=O)CCC(O)=O)cc9cc(O4)c(O5)cc9[n+]78)C(=O)N[C@@H](CCCC[NH2+]C(=O)[C@@H](NC1=O)[C@@H](C)O)C(=O)N2)O6)|O=C3
SMILES CACTVS 3.370 C[CH](O)[CH]1NC(=O)[CH]2CCC[N]3O[Fe+3]456(|O=C[N](CCC[CH](NC(=O)[CH](CO)NC(=O)[CH](CCCNC(N)=[NH2+])NC(=O)[CH](CO)NC(=O)[CH]7CCNc8c(NC(=O)CCC(O)=O)cc9cc(O4)c(O5)cc9[n+]78)C(=O)N[CH](CCCC[NH2+]C(=O)[CH](NC1=O)[CH](C)O)C(=O)N2)O6)|O=C3
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 C[C@H]([C@H]1C(=O)[NH2+]CCCC[C@H]2C(=O)N[C@@H](CCCN3C=O[Fe+3]456(O3)O=CN(O4)CCC[C@@H](C(=O)N2)NC(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@@H]7CCNc8[n+]7c9cc(c(cc9cc8NC(=O)CCC(=O)O)O5)O6)CO)CCCNC(=[NH2+])N)CO)C(=O)N[C@H](C(=O)N1)[C@@H](C)O)O
SMILES OpenEye OEToolkits 1.7.6 CC(C1C(=O)[NH2+]CCCCC2C(=O)NC(CCCN3C=O[Fe+3]456(O3)O=CN(O4)CCCC(C(=O)N2)NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C7CCNc8[n+]7c9cc(c(cc9cc8NC(=O)CCC(=O)O)O5)O6)CO)CCCNC(=[NH2+])N)CO)C(=O)NC(C(=O)N1)C(C)O)O
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