Structural Complex
Chemical ID: N3E
IUPAC Name: 1-[3-(4-CARBOXYPIPERIDIN-1-YL)-3-DEOXY-BETA-D-ARABINOFURANOSYL]PYRIMIDINE-2,4(1H,3H)-DIONE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2C[C@H](N3CCCCC3)CO2)c(=O)[nH]1
InChI: InChI=1S/C13H19N3O3/c17-11-4-7-16(13(18)14-11)12-8-10(9-19-12)15-5-2-1-3-6-15/h4,7,10,12H,1-3,5-6,8-9H2,(H,14,17,18)/t10-,12+/m0/s1
InChI Key: NLANWRWWVWFVCO-CMPLNLGQSA-N
Physiochemical Descriptor:
Formula: C15 H21 N3 O7
Molecular weight: 355.343
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 4
Rotatable Bonds: 6
Heavy Atoms: 25
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-[3-(4-carboxypiperidin-1-yl)-3-deoxy-beta-D-arabinofuranosyl]pyrimidine-2,4(1H,3H)-dione
OpenEye OEToolkits 1.5.0 1-[(2S,3S,4S,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]piperidine-4-carboxylic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(O)C3CCN(C2C(OC(N1C(=O)NC(=O)C=C1)C2O)CO)CC3
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H]([C@@H](O)[C@@H]1N2CC[C@H](CC2)C(O)=O)N3C=CC(=O)NC3=O
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O)[CH]1N2CC[CH](CC2)C(O)=O)N3C=CC(=O)NC3=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1CN(CCC1C(=O)O)[C@@H]2[C@H](O[C@H]([C@H]2O)N3C=CC(=O)NC3=O)CO
SMILES OpenEye OEToolkits 1.5.0 C1CN(CCC1C(=O)O)C2C(OC(C2O)N3C=CC(=O)NC3=O)CO
InChI InChI 1.03 InChI=1S/C15H21N3O7/c19-7-9-11(17-4-1-8(2-5-17)14(22)23)12(21)13(25-9)18-6-3-10(20)16-15(18)24/h3,6,8-9,11-13,19,21H,1-2,4-5,7H2,(H,22,23)(H,16,20,24)/t9-,11-,12+,13-/m1/s1
InChIKey InChI 1.03 IBEGWFLXVPJKRI-FOUMNBMASA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL469949
PubChem 9547944
ZINC ZINC000024805486