ISDA: 2EUD

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: GCQ

IUPAC Name: GEMCITABINE DIPHOSPHATE

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ncccn1[C@H]1CCCO1

InChI: InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1

InChI Key: AKXKPKRAUWTVBW-SSDOTTSWSA-N

Physiochemical Descriptor:

Formula: C9 H13 F2 N3 O10 P2

Molecular weight: 423.158

Hydrogen Bond Acceptor: 13

Hydrogen Bond Donor: 5

Rotatable Bonds: 11

Heavy Atoms: 26

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	2'-deoxy-2',2'-difluorocytidine 5'-(trihydrogen diphosphate)
OpenEye OEToolkits	1.5.0	[(2R,3R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4,4-difluoro-3-hydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)N=C(N)C=C1)C(F)(F)C2O
SMILES_CANONICAL	CACTVS	3.341	NC1=NC(=O)N(C=C1)[C@@H]2O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)C2(F)F
SMILES	CACTVS	3.341	NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)C2(F)F
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	C1=CN(C(=O)N=C1N)[C@H]2C([C@@H]([C@H](O2)CO[P@](=O)(O)OP(=O)(O)O)O)(F)F
SMILES	OpenEye OEToolkits	1.5.0	C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)(F)F
InChI	InChI	1.03	InChI=1S/C9H13F2N3O10P2/c10-9(11)6(15)4(3-22-26(20,21)24-25(17,18)19)23-7(9)14-2-1-5(12)13-8(14)16/h1-2,4,6-7,15H,3H2,(H,20,21)(H2,12,13,16)(H2,17,18,19)/t4-,6-,7-/m1/s1
InChIKey	InChI	1.03	FRQISCZGNNXEMD-QPPQHZFASA-N

Chemical Database Mapping