Structural Complex
Chemical ID: XTS
IUPAC Name: 9-[(2R,3R,4S,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)OXOLAN-2-YL]-3H-PURINE-2,6-DIONE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]c(=O)c2ncn([C@@H]3CCCO3)c2[nH]1
InChI: InChI=1S/C9H10N4O3/c14-8-6-7(11-9(15)12-8)13(4-10-6)5-2-1-3-16-5/h4-5H,1-3H2,(H2,11,12,14,15)/t5-/m0/s1
InChI Key: OQOJIIPEEFHULF-YFKPBYRVSA-N
Physiochemical Descriptor:
Formula: C10 H12 N4 O6
Molecular weight: 284.225
Hydrogen Bond Acceptor: 8
Hydrogen Bond Donor: 5
Rotatable Bonds: 5
Heavy Atoms: 20
Systematic name
Program Version Descriptor
ACDLabs 10.04 xanthosine
OpenEye OEToolkits 1.5.0 9-[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purine-2,6-dione
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C3Nc1c(ncn1C2OC(C(O)C2O)CO)C(=O)N3
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@@H]([C@H](O)[C@@H]1O)n2cnc3C(=O)NC(=O)Nc23
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3C(=O)NC(=O)Nc23
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)NC(=O)NC2=O
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3C(C(C(O3)CO)O)O)NC(=O)NC2=O
InChI InChI 1.03 InChI=1S/C10H12N4O6/c15-1-3-5(16)6(17)9(20-3)14-2-11-4-7(14)12-10(19)13-8(4)18/h2-3,5-6,9,15-17H,1H2,(H2,12,13,18,19)/t3-,5-,6-,9+/m1/s1
InChIKey InChI 1.03 UBORTCNDUKBEOP-BDXYJKHTSA-N
Chemical Database Mapping
Database Reference ID
PubChem 16058612
ZINC ZINC000016051973