Structural Complex
Chemical ID: BT5
IUPAC Name: BIOTINYL-5-AMP
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1N[C@H]2[C@H](CS[C@H]2CCCCC(=O)O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4cncnc43)O2)N1
InChI: InChI=1S/C20H27N6O6PS/c27-17(4-2-1-3-15-18-14(9-34-15)24-20(28)25-18)32-33(29)30-8-12-5-6-16(31-12)26-11-23-13-7-21-10-22-19(13)26/h7,10-12,14-16,18,33H,1-6,8-9H2,(H2,24,25,28)/t12-,14-,15-,16+,18-/m0/s1
InChI Key: IMRKWFPINNITKY-NBGIZXCLSA-N
Physiochemical Descriptor:
Formula: C20 H28 N7 O9 P S
Molecular weight: 573.517
Hydrogen Bond Acceptor: 15
Hydrogen Bond Donor: 6
Rotatable Bonds: 14
Heavy Atoms: 38
Systematic name
Program Version Descriptor
ACDLabs 10.04 5'-O-[(R)-hydroxy({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}oxy)phosphoryl]adenosine
OpenEye OEToolkits 1.5.0 [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NC2C(SCC2N1)CCCCC(=O)OP(=O)(O)OCC5OC(n3c4ncnc(N)c4nc3)C(O)C5O
InChI InChI 1.03 InChI=1S/C20H28N7O9PS/c21-17-14-18(23-7-22-17)27(8-24-14)19-16(30)15(29)10(35-19)5-34-37(32,33)36-12(28)4-2-1-3-11-13-9(6-38-11)25-20(31)26-13/h7-11,13,15-16,19,29-30H,1-6H2,(H,32,33)(H2,21,22,23)(H2,25,26,31)/t9-,10+,11-,13-,15+,16+,19+/m0/s1
InChIKey InChI 1.03 UTQCSTJVMLODHM-RHCAYAJFSA-N
SMILES_CANONICAL CACTVS 3.385 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)OC(=O)CCCC[C@@H]4SC[C@@H]5NC(=O)N[C@H]45)[C@@H](O)[C@H]3O
SMILES CACTVS 3.385 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC(=O)CCCC[CH]4SC[CH]5NC(=O)N[CH]45)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.7.5 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)OC(=O)CCCC[C@H]4[C@@H]5[C@H](CS4)NC(=O)N5)O)O)N
SMILES OpenEye OEToolkits 1.7.5 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC(=O)CCCCC4C5C(CS4)NC(=O)N5)O)O)N
Chemical Database Mapping
Database Reference ID
PubChem 5326875
ChEBI 3110
ZINC ZINC000008551918