Structural Complex
Chemical ID: U2P
IUPAC Name: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2CCCO2)c(=O)[nH]1
InChI: InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1
InChI Key: CWWIKVUHBBTKHC-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H13 N2 O9 P
Molecular weight: 324.181
Hydrogen Bond Acceptor: 10
Hydrogen Bond Donor: 5
Rotatable Bonds: 8
Heavy Atoms: 21
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-uridylic acid
OpenEye OEToolkits 1.5.0 [(2R,3R,4R,5R)-2-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NC(=O)N(C=C1)C2OC(C(O)C2OP(=O)(O)O)CO
SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H]([C@H](O[P](O)(O)=O)[C@@H]1O)N2C=CC(=O)NC2=O
SMILES CACTVS 3.341 OC[CH]1O[CH]([CH](O[P](O)(O)=O)[CH]1O)N2C=CC(=O)NC2=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)OP(=O)(O)O
SMILES OpenEye OEToolkits 1.5.0 C1=CN(C(=O)NC1=O)C2C(C(C(O2)CO)O)OP(=O)(O)O
InChI InChI 1.03 InChI=1S/C9H13N2O9P/c12-3-4-6(14)7(20-21(16,17)18)8(19-4)11-2-1-5(13)10-9(11)15/h1-2,4,6-8,12,14H,3H2,(H,10,13,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey InChI 1.03 HQIDPEYTETUCNF-XVFCMESISA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL447360
PubChem 101609
ChEBI 28070
ZINC ZINC000004095997
SureChEMBL SCHEMBL2056829
HMDB HMDB0011641