Structural Complex
Chemical ID: 3DG
IUPAC Name: 9-(3-DEOXY-BETA-D-RIBOFURANOSYL)GUANINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula: C10 H13 N5 O4
Molecular weight: 267.241
Hydrogen Bond Acceptor: 8
Hydrogen Bond Donor: 4
Rotatable Bonds: 5
Heavy Atoms: 19
Systematic name
Program Version Descriptor
ACDLabs 10.04 3'-deoxyguanosine
OpenEye OEToolkits 1.5.0 2-amino-9-[(2R,3R,5S)-3-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-1H-purin-6-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1c2ncn(c2N=C(N)N1)C3OC(CC3O)CO
SMILES_CANONICAL CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)C[C@H]3O
SMILES CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)C[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@H]3[C@@H](C[C@H](O3)CO)O)N=C(NC2=O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3C(CC(O3)CO)O)N=C(NC2=O)N
InChI InChI 1.03 InChI=1S/C10H13N5O4/c11-10-13-7-6(8(18)14-10)12-3-15(7)9-5(17)1-4(2-16)19-9/h3-5,9,16-17H,1-2H2,(H3,11,13,14,18)/t4-,5+,9+/m0/s1
InChIKey InChI 1.03 OROIAVZITJBGSM-OBXARNEKSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB03609
ChEMBL CHEMBL73502
PubChem 135440068
ChEBI 39874
ZINC ZINC000006119279
SureChEMBL SCHEMBL98906