Structural Complex
Chemical ID: J12
IUPAC Name: N-{3-[4-(3-AMINO-PROPYL)-PIPERAZIN-1-YL]-PROPYL}-3-(2-THIOPHEN-2-YL-ACETYLAMINO)-5-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-BENZAMIDE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(Cc1cccs1)Nc1cc(O[C@@H]2CCCCO2)cc(C(=O)NCCCN2CCNCC2)c1
InChI: InChI=1S/C25H34N4O4S/c30-23(18-22-5-3-14-34-22)28-20-15-19(16-21(17-20)33-24-6-1-2-13-32-24)25(31)27-7-4-10-29-11-8-26-9-12-29/h3,5,14-17,24,26H,1-2,4,6-13,18H2,(H,27,31)(H,28,30)/t24-/m1/s1
InChI Key: UATHEBGIIGXWSP-XMMPIXPASA-N
Physiochemical Descriptor:
Formula: C29 H43 N5 O8 S
Molecular weight: 621.745
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 7
Rotatable Bonds: 19
Heavy Atoms: 43
Systematic name
Program Version Descriptor
ACDLabs 10.04 N-{3-[4-(3-aminopropyl)piperazin-1-yl]propyl}-3-(alpha-D-galactopyranosyloxy)-5-[(thiophen-2-ylacetyl)amino]benzamide
OpenEye OEToolkits 1.5.0 N-[3-[4-(3-aminopropyl)piperazin-1-yl]propyl]-3-(2-thiophen-2-ylethanoylamino)-5-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-benzamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(Nc3cc(C(=O)NCCCN1CCN(CCCN)CC1)cc(OC2OC(CO)C(O)C(O)C2O)c3)Cc4sccc4
SMILES_CANONICAL CACTVS 3.341 NCCCN1CCN(CCCNC(=O)c2cc(NC(=O)Cc3sccc3)cc(O[C@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)c2)CC1
SMILES CACTVS 3.341 NCCCN1CCN(CCCNC(=O)c2cc(NC(=O)Cc3sccc3)cc(O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4O)c2)CC1
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cc(sc1)CC(=O)Nc2cc(cc(c2)O[C@@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O)C(=O)NCCCN4CCN(CC4)CCCN
SMILES OpenEye OEToolkits 1.5.0 c1cc(sc1)CC(=O)Nc2cc(cc(c2)OC3C(C(C(C(O3)CO)O)O)O)C(=O)NCCCN4CCN(CC4)CCCN
InChI InChI 1.03 InChI=1S/C29H43N5O8S/c30-5-2-7-33-9-11-34(12-10-33)8-3-6-31-28(40)19-14-20(32-24(36)17-22-4-1-13-43-22)16-21(15-19)41-29-27(39)26(38)25(37)23(18-35)42-29/h1,4,13-16,23,25-27,29,35,37-39H,2-3,5-12,17-18,30H2,(H,31,40)(H,32,36)/t23-,25+,26+,27-,29+/m1/s1
InChIKey InChI 1.03 ZIXIINLBMSXOQV-ADWZMSLQSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB03524
PubChem 49867166
ZINC ZINC000058639008
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