Structural Complex
Chemical ID: PRD_000205
IUPAC Name: DESVANCOSAMINYL VANCOMYCIN
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CCc2ccc(cc2)Oc2cc3cc(c2O[C@H]2CCCCO2)Oc2ccc(cc2)C[C@@H]2NC(=O)[C@H](NC(=O)[C@@H]3NC(=O)CN1)c1cccc(c1)-c1ccccc1CNC2=O
InChI: InChI=1S/C48H45N5O9/c54-40-20-15-28-11-16-34(17-12-28)60-38-24-33-25-39(45(38)62-42-10-3-4-21-59-42)61-35-18-13-29(14-19-35)22-37-46(56)50-26-32-6-1-2-9-36(32)30-7-5-8-31(23-30)43(47(57)51-37)53-48(58)44(33)52-41(55)27-49-40/h1-2,5-9,11-14,16-19,23-25,37,42-44H,3-4,10,15,20-22,26-27H2,(H,49,54)(H,50,56)(H,51,57)(H,52,55)(H,53,58)/t37-,42-,43+,44+/m0/s1
InChI Key: OMOHNDNGDKYNKA-CVVGNRLCSA-N
Physiochemical Descriptor:
Formula: C59 H62 Cl2 N8 O22
Molecular weight: 1306.070
Hydrogen Bond Acceptor: 23
Hydrogen Bond Donor: 18
Rotatable Bonds: 23
Heavy Atoms: 91
Systematic name
Program Version Descriptor
ACDLabs 12.01 (1R,2S,18S,19S,22R,25R,28S,40S)-22-(2-amino-2-oxoethyl)-5,15-dichloro-2,18,32,35,37-pentahydroxy-19-{[(2R)-4-methyl-2-(methylamino)pentanoyl]amino}-20,23,26,42,44-pentaoxo-48-{[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.2~3,6~.2~14,17~.1~8,12~.1~29,33~.0~10,25~.0~34,39~]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid (non-preferred name)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)C3c1cc(O)cc(O)c1c2c(O)ccc(c2)C8C(=O)NC(C(=O)N3)C(O)c9ccc(Oc7c(OC4OC(CO)C(O)C(O)C4O)c6Oc5ccc(cc5Cl)C(O)C(NC(=O)C(NC)CC(C)C)C(=O)NC(C(=O)NC(c(c6)c7)C(=O)N8)CC(=O)N)c(Cl)c9
InChI InChI 1.03 InChI=1S/C59H62Cl2N8O22/c1-20(2)10-30(63-3)52(80)68-44-46(75)22-5-8-34(28(60)12-22)88-36-14-24-15-37(51(36)91-59-50(79)49(78)48(77)38(19-70)90-59)89-35-9-6-23(13-29(35)61)47(76)45-57(85)67-43(58(86)87)27-16-25(71)17-33(73)40(27)26-11-21(4-7-32(26)72)41(54(82)69-45)66-55(83)42(24)65-53(81)31(18-39(62)74)64-56(44)84/h4-9,11-17,20,30-31,38,41-50,59,63,70-73,75-79H,10,18-19H2,1-3H3,(H2,62,74)(H,64,84)(H,65,81)(H,66,83)(H,67,85)(H,68,80)(H,69,82)(H,86,87)
InChIKey InChI 1.03 QCHYVJAUGVHJHX-UHFFFAOYSA-N
SMILES_CANONICAL CACTVS 3.370 CN[C@H](CC(C)C)C(=O)N[C@@H]1[C@H](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[C@@H](O)[C@@H]6NC(=O)[C@H](NC(=O)[C@@H]4NC(=O)[C@H](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[C@H](NC6=O)C(O)=O)c3O[C@@H]9O[C@H](CO)[C@@H](O)[C@H](O)[C@H]9O)c(Cl)c2
SMILES CACTVS 3.370 CN[CH](CC(C)C)C(=O)N[CH]1[CH](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[CH](O)[CH]6NC(=O)[CH](NC(=O)[CH]4NC(=O)[CH](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[CH](NC6=O)C(O)=O)c3O[CH]9O[CH](CO)[CH](O)[CH](O)[CH]9O)c(Cl)c2
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC(C)C[C@H](C(=O)N[C@@H]1[C@@H](c2ccc(c(c2)Cl)Oc3cc4cc(c3O[C@@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)Oc6ccc(cc6Cl)[C@H]([C@H]7C(=O)N[C@@H](c8cc(cc(c8-c9cc(ccc9O)[C@H](C(=O)N7)NC(=O)[C@@H]4NC(=O)[C@@H](NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC
SMILES OpenEye OEToolkits 1.7.6 CC(C)CC(C(=O)NC1C(c2ccc(c(c2)Cl)Oc3cc4cc(c3OC5C(C(C(C(O5)CO)O)O)O)Oc6ccc(cc6Cl)C(C7C(=O)NC(c8cc(cc(c8-c9cc(ccc9O)C(C(=O)N7)NC(=O)C4NC(=O)C(NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC
Chemical Database Mapping
Database Reference ID
PubChem 14039120