Structural Complex
Chemical ID: CR9
IUPAC Name: 2-{5-[AMINO(IMINIO)METHYL]-6-FLUORO-1H-BENZIMIDAZOL-2-YL}-6-[(2-METHYLCYCLOHEXYL)OXY]BENZENOLATE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1cc(OC2CCCCC2)cc(-c2nc3ccccc3[nH]2)c1
InChI: InChI=1S/C19H20N2O/c1-2-8-15(9-3-1)22-16-10-6-7-14(13-16)19-20-17-11-4-5-12-18(17)21-19/h4-7,10-13,15H,1-3,8-9H2,(H,20,21)
InChI Key: VMKMHIIXDLWGKY-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C21 H23 F N4 O2
Molecular weight: 382.431
Hydrogen Bond Acceptor: 3
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 28
Systematic name
Program Version Descriptor
ACDLabs 10.04 2-{5-[amino(iminio)methyl]-6-fluoro-1H-benzimidazol-2-yl}-6-{[(1S,2S)-2-methylcyclohexyl]oxy}phenolate
OpenEye OEToolkits 1.5.0 2-[5-(amino-azaniumylidene-methyl)-6-fluoro-1H-benzimidazol-2-yl]-6-[(1S,2S)-2-methylcyclohexyl]oxy-phenolate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 [O-]c4c(OC1CCCCC1C)cccc4c3nc2cc(c(F)cc2n3)\C(=[NH2+])N
SMILES_CANONICAL CACTVS 3.341 C[C@H]1CCCC[C@@H]1Oc2cccc(c2[O-])c3[nH]c4cc(F)c(cc4n3)C(N)=[NH2+]
SMILES CACTVS 3.341 C[CH]1CCCC[CH]1Oc2cccc(c2[O-])c3[nH]c4cc(F)c(cc4n3)C(N)=[NH2+]
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C[C@H]1CCCC[C@@H]1Oc2cccc(c2[O-])c3[nH]c4cc(c(cc4n3)C(=[NH2+])N)F
SMILES OpenEye OEToolkits 1.5.0 CC1CCCCC1Oc2cccc(c2[O-])c3[nH]c4cc(c(cc4n3)C(=[NH2+])N)F
InChI InChI 1.03 InChI=1S/C21H23FN4O2/c1-11-5-2-3-7-17(11)28-18-8-4-6-12(19(18)27)21-25-15-9-13(20(23)24)14(22)10-16(15)26-21/h4,6,8-11,17,27H,2-3,5,7H2,1H3,(H3,23,24)(H,25,26)/t11-,17-/m0/s1
InChIKey InChI 1.03 CMCDWLMEDRBWIR-GTNSWQLSSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB03555
ChEMBL CHEMBL62807
PubChem 447490
ZINC ZINC000005890661