Structural Complex
Chemical ID: 655
IUPAC Name: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-(CYCLOPENTYLOXY)BENZENOLATE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1cc(OC2CCCC2)cc(-c2nc3ccccc3[nH]2)c1
InChI: InChI=1S/C18H18N2O/c1-2-8-14(7-1)21-15-9-5-6-13(12-15)18-19-16-10-3-4-11-17(16)20-18/h3-6,9-12,14H,1-2,7-8H2,(H,19,20)
InChI Key: RNVLJAMMUHZFRI-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C19 H20 N4 O2
Molecular weight: 336.388
Hydrogen Bond Acceptor: 3
Hydrogen Bond Donor: 3
Rotatable Bonds: 4
Heavy Atoms: 25
Systematic name
Program Version Descriptor
ACDLabs 10.04 2-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-6-(cyclopentyloxy)phenolate
OpenEye OEToolkits 1.5.0 2-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]-6-cyclopentyloxy-phenolate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 [O-]c4c(OC1CCCC1)cccc4c3nc2cc(ccc2n3)\C(=[NH2+])N
SMILES_CANONICAL CACTVS 3.341 NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cccc(OC4CCCC4)c3[O-]
SMILES CACTVS 3.341 NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cccc(OC4CCCC4)c3[O-]
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cc(c(c(c1)OC2CCCC2)[O-])c3[nH]c4ccc(cc4n3)C(=[NH2+])N
SMILES OpenEye OEToolkits 1.5.0 c1cc(c(c(c1)OC2CCCC2)[O-])c3[nH]c4ccc(cc4n3)C(=[NH2+])N
InChI InChI 1.03 InChI=1S/C19H20N4O2/c20-18(21)11-8-9-14-15(10-11)23-19(22-14)13-6-3-7-16(17(13)24)25-12-4-1-2-5-12/h3,6-10,12,24H,1-2,4-5H2,(H3,20,21)(H,22,23)
InChIKey InChI 1.03 WCFWDBPDMBXMTQ-UHFFFAOYSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB02526
ChEMBL CHEMBL303992
PubChem 447480
ZINC ZINC000012354873