Structural Complex
Chemical ID: 5YL
IUPAC Name: 5-(6-D-RIBITYLAMINO-2,4(1H,3H)PYRIMIDINEDIONE-5-YL) PENTYL-1-PHOSPHONIC ACID
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1cc[nH]c(=O)[nH]1
InChI: InChI=1S/C4H4N2O2/c7-3-1-2-5-4(8)6-3/h1-2H,(H2,5,6,7,8)
InChI Key: ISAKRJDGNUQOIC-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C14 H26 N3 O9 P
Molecular weight: 411.345
Hydrogen Bond Acceptor: 10
Hydrogen Bond Donor: 9
Rotatable Bonds: 18
Heavy Atoms: 27
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-deoxy-1-{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino}-D-ribitol
OpenEye OEToolkits 1.5.0 5-[2,4-dioxo-6-[[(2S,3S,4R)-2,3,4,5-tetrahydroxypentyl]amino]-1H-pyrimidin-5-yl]pentylphosphonic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1NC(NCC(O)C(O)C(O)CO)=C(C(=O)N1)CCCCCP(=O)(O)O
SMILES_CANONICAL CACTVS 3.341 OC[C@@H](O)[C@@H](O)[C@@H](O)CNC1=C(CCCCC[P](O)(O)=O)C(=O)NC(=O)N1
SMILES CACTVS 3.341 OC[CH](O)[CH](O)[CH](O)CNC1=C(CCCCC[P](O)(O)=O)C(=O)NC(=O)N1
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C(CCC1=C(NC(=O)NC1=O)NC[C@@H]([C@@H]([C@@H](CO)O)O)O)CCP(=O)(O)O
SMILES OpenEye OEToolkits 1.5.0 C(CCC1=C(NC(=O)NC1=O)NCC(C(C(CO)O)O)O)CCP(=O)(O)O
InChI InChI 1.03 InChI=1S/C14H26N3O9P/c18-7-10(20)11(21)9(19)6-15-12-8(13(22)17-14(23)16-12)4-2-1-3-5-27(24,25)26/h9-11,18-21H,1-7H2,(H2,24,25,26)(H3,15,16,17,22,23)/t9-,10+,11-/m0/s1
InChIKey InChI 1.03 BMATWAHJJFXMFA-AXFHLTTASA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB04266
PubChem 445357
ZINC ZINC000003871086
SureChEMBL SCHEMBL4308248