ISDA: 1JHQ

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: PMO

IUPAC Name: N1-(5'-PHOSPHO-ALPHA-RIBOSYL)-5-METHOXYBENZIMIDAZOLE

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: c1ccc2c(c1)ncn2[C@@H]1CCCO1

InChI: InChI=1S/C11H12N2O/c1-2-5-10-9(4-1)12-8-13(10)11-6-3-7-14-11/h1-2,4-5,8,11H,3,6-7H2/t11-/m0/s1

InChI Key: ZRNBULRZQUQJID-NSHDSACASA-N

Physiochemical Descriptor:

Formula: C13 H17 N2 O8 P

Molecular weight: 360.256

Hydrogen Bond Acceptor: 10

Hydrogen Bond Donor: 4

Rotatable Bonds: 10

Heavy Atoms: 24

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	5-methoxy-1-(5-O-phosphono-alpha-D-ribofuranosyl)-1H-benzimidazole
OpenEye OEToolkits	1.5.0	[(2R,3S,4R,5S)-3,4-dihydroxy-5-(5-methoxybenzimidazol-1-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=P(O)(O)OCC3OC(n2cnc1cc(OC)ccc12)C(O)C3O
SMILES_CANONICAL	CACTVS	3.341	COc1ccc2n(cnc2c1)[C@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES	CACTVS	3.341	COc1ccc2n(cnc2c1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	COc1ccc2c(c1)ncn2[C@@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
SMILES	OpenEye OEToolkits	1.5.0	COc1ccc2c(c1)ncn2C3C(C(C(O3)COP(=O)(O)O)O)O
InChI	InChI	1.03	InChI=1S/C13H17N2O8P/c1-21-7-2-3-9-8(4-7)14-6-15(9)13-12(17)11(16)10(23-13)5-22-24(18,19)20/h2-4,6,10-13,16-17H,5H2,1H3,(H2,18,19,20)/t10-,11-,12-,13+/m1/s1
InChIKey	InChI	1.03	VYUPJUKSTVHSQI-LPWJVIDDSA-N

Chemical Database Mapping