Structural Complex
Chemical ID: PRD_000206
IUPAC Name: VANCOMYCIN AGLYCON
Formal Charge: ?
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CCc2ccc(cc2)Oc2cc3cc(c2)[C@@H](NC(=O)CN1)C(=O)N[C@H]1C(=O)N[C@@H](Cc2ccc(cc2)O3)C(=O)NCc2ccccc2-c2cccc1c2
InChI: InChI=1S/C43H37N5O7/c49-37-17-12-25-8-13-31(14-9-25)54-33-20-30-21-34(22-33)55-32-15-10-26(11-16-32)18-36-41(51)45-23-29-4-1-2-7-35(29)27-5-3-6-28(19-27)39(42(52)46-36)48-43(53)40(30)47-38(50)24-44-37/h1-11,13-16,19-22,36,39-40H,12,17-18,23-24H2,(H,44,49)(H,45,51)(H,46,52)(H,47,50)(H,48,53)/t36-,39+,40+/m0/s1
InChI Key: YREDJGNBYWUZGQ-HOAOOSOUSA-N
Physiochemical Descriptor:
Formula: C53 H52 Cl2 N8 O17
Molecular weight: 1143.929
Hydrogen Bond Acceptor: 18
Hydrogen Bond Donor: 15
Rotatable Bonds: 17
Heavy Atoms: 80
Systematic name
Program Version Descriptor
ACDLabs 12.01 (1S,2S,18R,19S,22R,25S,28R,40R)-22-(2-amino-2-oxoethyl)-5,15-dichloro-2,18,32,35,37,48-hexahydroxy-19-{[(2R)-4-methyl-2-(methylamino)pentanoyl]amino}-20,23,26,42,44-pentaoxo-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.2~3,6~.2~14,17~.1~8,12~.1~29,33~.0~10,25~.0~34,39~]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid (non-preferred name)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C(O)C2c8cc(O)cc(O)c8c1c(O)ccc(c1)C5C(=O)NC(C(=O)N2)C(O)c7cc(Cl)c(Oc6cc4cc(Oc3ccc(cc3Cl)C(O)C(NC(=O)C(NC)CC(C)C)C(=O)NC(C(=O)NC4C(=O)N5)CC(=O)N)c6O)cc7
InChI InChI 1.03 InChI=1S/C53H52Cl2N8O17/c1-19(2)10-29(57-3)47(71)62-42-44(68)21-5-8-33(27(54)12-21)79-35-14-23-15-36(46(35)70)80-34-9-6-22(13-28(34)55)45(69)43-52(76)61-41(53(77)78)26-16-24(64)17-32(66)38(26)25-11-20(4-7-31(25)65)39(49(73)63-43)60-50(74)40(23)59-48(72)30(18-37(56)67)58-51(42)75/h4-9,11-17,19,29-30,39-45,57,64-66,68-70H,10,18H2,1-3H3,(H2,56,67)(H,58,75)(H,59,72)(H,60,74)(H,61,76)(H,62,71)(H,63,73)(H,77,78)/t29-,30?,39-,40-,41+,42+,43+,44-,45-/m1/s1
InChIKey InChI 1.03 JHIKFOISFAQTJQ-WRXFTAGKSA-N
SMILES_CANONICAL CACTVS 3.370 CN[C@H](CC(C)C)C(=O)N[C@@H]1[C@H](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[C@@H](O)[C@@H]6NC(=O)[C@H](NC(=O)[C@@H]4NC(=O)[C@H](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[C@H](NC6=O)C(O)=O)c3O)c(Cl)c2
SMILES CACTVS 3.370 CN[CH](CC(C)C)C(=O)N[CH]1[CH](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[CH](O)[CH]6NC(=O)[CH](NC(=O)[CH]4NC(=O)[CH](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[CH](NC6=O)C(O)=O)c3O)c(Cl)c2
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC(C)C[C@H](C(=O)N[C@@H]1[C@@H](c2ccc(c(c2)Cl)Oc3cc4cc(c3O)Oc5ccc(cc5Cl)[C@H]([C@H]6C(=O)N[C@@H](c7cc(cc(c7-c8cc(ccc8O)[C@H](C(=O)N6)NC(=O)[C@@H]4NC(=O)[C@@H](NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC
SMILES OpenEye OEToolkits 1.7.6 CC(C)CC(C(=O)NC1C(c2ccc(c(c2)Cl)Oc3cc4cc(c3O)Oc5ccc(cc5Cl)C(C6C(=O)NC(c7cc(cc(c7-c8cc(ccc8O)C(C(=O)N6)NC(=O)C4NC(=O)C(NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC
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