Structural Complex
Chemical ID: BAB
IUPAC Name: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE
Formal Charge: 3
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2[nH]c(Cc3[nH]c4ccccc4[nH+]3)nc2c1
InChI: InChI=1S/C15H12N4/c1-2-6-11-10(5-1)16-14(17-11)9-15-18-12-7-3-4-8-13(12)19-15/h1-8H,9H2,(H,16,17)(H,18,19)/p+1
InChI Key: VPJBLVPIUUNPLB-UHFFFAOYSA-O
Physiochemical Descriptor:
Formula: C17 H19 N8
Molecular weight: 335.386
Hydrogen Bond Acceptor: 1
Hydrogen Bond Donor: 6
Rotatable Bonds: 4
Heavy Atoms: 25
Systematic name
Program Version Descriptor
ACDLabs 10.04 6-[amino(iminio)methyl]-2-({6-[amino(iminio)methyl]-1H-benzimidazol-2-yl}methyl)-1H-benzimidazol-3-ium
OpenEye OEToolkits 1.5.0 [amino-[2-[[6-(amino-azaniumylidene-methyl)-1H-benzimidazol-3-ium-2-yl]methyl]-3H-benzimidazol-5-yl]methylidene]azanium
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 n2c1ccc(cc1nc2Cc4[nH+]c3ccc(C(=[NH2+])\N)cc3n4)\C(=[NH2+])N
SMILES_CANONICAL CACTVS 3.341 NC(=[NH2+])c1ccc2nc(Cc3[nH]c4cc(ccc4[nH+]3)C(N)=[NH2+])[nH]c2c1
SMILES CACTVS 3.341 NC(=[NH2+])c1ccc2nc(Cc3[nH]c4cc(ccc4[nH+]3)C(N)=[NH2+])[nH]c2c1
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cc2c(cc1C(=[NH2+])N)[nH]c([nH+]2)Cc3[nH]c4cc(ccc4n3)C(=[NH2+])N
SMILES OpenEye OEToolkits 1.5.0 c1cc2c(cc1C(=[NH2+])N)[nH]c([nH+]2)Cc3[nH]c4cc(ccc4n3)C(=[NH2+])N
InChI InChI 1.03 InChI=1S/C17H16N8/c18-16(19)8-1-3-10-12(5-8)24-14(22-10)7-15-23-11-4-2-9(17(20)21)6-13(11)25-15/h1-6H,7H2,(H3,18,19)(H3,20,21)(H,22,24)(H,23,25)/p+3
InChIKey InChI 1.03 QZKOOEFIMWKZPK-UHFFFAOYSA-Q
Chemical Database Mapping
Database Reference ID
DrugBank DB01705
PubChem 6398417