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Summary
Structure Feature
Experiment
Ligands & Environment
1EPV
pdb_00001epv
10.2210/pdb1epv/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
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FASTA Zipped(.gz)
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Binary MMCIF Zipped(.gz)
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Validation File Zipped (.xml.gz)
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DCS
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
DCS
IUPAC Name:
D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Formal Charge:
0
Type:
NON-POLYMER
Substructure
Substruture Type:
MurckoScaffold
SMILES:
O=C1NOC[C@H]1NCc1ccncc1
InChI:
InChI=1S/C9H11N3O2/c13-9-8(6-14-12-9)11-5-7-1-3-10-4-2-7/h1-4,8,11H,5-6H2,(H,12,13)/t8-/m1/s1
InChI Key:
PRXZLGWRCSMHPW-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula:
C11 H16 N3 O7 P
Molecular weight:
333.234
Hydrogen Bond Acceptor:
9
Hydrogen Bond Donor:
5
Rotatable Bonds:
10
Heavy Atoms:
22
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
[5-hydroxy-6-methyl-4-({[(4R)-3-oxoisoxazolidin-4-yl]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate
OpenEye OEToolkits
1.5.0
[5-hydroxy-6-methyl-4-[[[(4R)-3-oxo-1,2-oxazolidin-4-yl]amino]methyl]pyridin-3-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
O=C2NOCC2NCc1c(cnc(c1O)C)COP(=O)(O)O
SMILES_CANONICAL
CACTVS
3.341
Cc1ncc(CO[P](O)(O)=O)c(CN[C@@H]2CONC2=O)c1O
SMILES
CACTVS
3.341
Cc1ncc(CO[P](O)(O)=O)c(CN[CH]2CONC2=O)c1O
SMILES_CANONICAL
OpenEye OEToolkits
1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)CN[C@@H]2CONC2=O)O
SMILES
OpenEye OEToolkits
1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)CNC2CONC2=O)O
InChI
InChI
1.03
InChI=1S/C11H16N3O7P/c1-6-10(15)8(3-13-9-5-20-14-11(9)16)7(2-12-6)4-21-22(17,18)19/h2,9,13,15H,3-5H2,1H3,(H,14,16)(H2,17,18,19)/t9-/m1/s1
InChIKey
InChI
1.03
NNRZSZJOQKAGTO-SECBINFHSA-N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB02038
PubChem
445005
ZINC
ZINC000002043174
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