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Summary
Structure Feature
Experiment
Ligands & Environment
1CXZ
pdb_00001cxz
10.2210/pdb1cxz/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
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FASTA Zipped(.gz)
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Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
GSP
MG
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
GSP
IUPAC Name:
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
Formal Charge:
0
Type:
NON-POLYMER
Substructure
Substruture Type:
MurckoScaffold
SMILES:
O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI:
InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key:
JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula:
C10 H16 N5 O13 P3 S
Molecular weight:
539.246
Hydrogen Bond Acceptor:
18
Hydrogen Bond Donor:
8
Rotatable Bonds:
15
Heavy Atoms:
32
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
5'-O-[(S)-hydroxy{[(S)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]guanosine
OpenEye OEToolkits
1.5.0
[[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] dihydroxyphosphinothioyl hydrogen phosphate
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
S=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O
SMILES_CANONICAL
CACTVS
3.341
NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
SMILES
CACTVS
3.341
NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
SMILES_CANONICAL
OpenEye OEToolkits
1.5.0
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
SMILES
OpenEye OEToolkits
1.5.0
c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
InChI
InChI
1.03
InChI=1S/C10H16N5O13P3S/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(26-9)1-25-29(19,20)27-30(21,22)28-31(23,24)32/h2-3,5-6,9,16-17H,1H2,(H,19,20)(H,21,22)(H2,23,24,32)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey
InChI
1.03
XOFLBQFBSOEHOG-UUOKFMHZSA-N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB01864
ChEMBL
CHEMBL1204628
PubChem
135398675
ChEBI
43000
ZINC
ZINC000008217391
SureChEMBL
SCHEMBL932313
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