Structural Complex
Chemical ID: BNR
IUPAC Name: BIS-DAUNORUBICIN
Formal Charge: 2
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1c2ccccc2C(=O)c2cc3c(cc21)CCC[C@@H]3O[C@H]1CC[C@H]([NH2+]Cc2ccc(C[NH2+][C@H]3CC[C@H](O[C@H]4CCCc5cc6c(cc54)C(=O)c4ccccc4C6=O)OC3)cc2)CO1
InChI: InChI=1S/C54H52N2O8/c57-51-37-9-1-3-11-39(37)53(59)45-25-41-33(23-43(45)51)7-5-13-47(41)63-49-21-19-35(29-61-49)55-27-31-15-17-32(18-16-31)28-56-36-20-22-50(62-30-36)64-48-14-6-8-34-24-44-46(26-42(34)48)54(60)40-12-4-2-10-38(40)52(44)58/h1-4,9-12,15-18,23-26,35-36,47-50,55-56H,5-8,13-14,19-22,27-30H2/p+2/t35-,36-,47-,48-,49-,50-/m0/s1
InChI Key: LXAKHFRVDHKEPL-NAJRDONUSA-P
Physiochemical Descriptor:
Formula: C62 H66 N2 O20
Molecular weight: 1159.189
Hydrogen Bond Acceptor: 20
Hydrogen Bond Donor: 10
Rotatable Bonds: 28
Heavy Atoms: 84
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2S,3S,4S,6R,2'S,3'S,4'S,6'R)-N,N'-(benzene-1,4-diyldimethanediyl)bis(6-{[(1S,3S)-3-acetyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl]oxy}-4-hydroxy-2-methyltetrahydro-2H-pyran-3-aminium) (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2S,3S,4S,6R)-6-[[(1S,3S)-3-ethanoyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-2,4-dihydro-1H-tetracen-1-yl]oxy]-4-hydroxy-2-methyl-oxan-3-yl]-[[4-[[(2S,3S,4S,6R)-6-[[(1S,3S)-3-ethanoyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-2,4-dihydro-1H-tetracen-1-yl]oxy]-4-hydroxy-2-methyl-oxan-3-yl]azaniumylmethyl]phenyl]methyl]azanium
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C2c1c(O)c%11c(c(O)c1C(=O)c3cccc(OC)c23)CC(O)(C(=O)C)CC%11OC4OC(C)C(C(O)C4)[NH2+]Cc5ccc(cc5)C[NH2+]C%10C(OC(OC9c8c(O)c7C(=O)c6c(OC)cccc6C(=O)c7c(O)c8CC(O)(C(=O)C)C9)CC%10O)C
SMILES_CANONICAL CACTVS 3.341 COc1cccc2C(=O)c3c(O)c4C[C@](O)(C[C@H](O[C@H]5C[C@H](O)[C@H]([NH2+]Cc6ccc(C[NH2+][C@H]7[C@@H](O)C[C@@H](O[C@H]7C)O[C@H]8C[C@@](O)(Cc9c(O)c%10C(=O)c%11cccc(OC)c%11C(=O)c%10c(O)c89)C(C)=O)cc6)[C@H](C)O5)c4c(O)c3C(=O)c12)C(C)=O
SMILES CACTVS 3.341 COc1cccc2C(=O)c3c(O)c4C[C](O)(C[CH](O[CH]5C[CH](O)[CH]([NH2+]Cc6ccc(C[NH2+][CH]7[CH](O)C[CH](O[CH]7C)O[CH]8C[C](O)(Cc9c(O)c%10C(=O)c%11cccc(OC)c%11C(=O)c%10c(O)c89)C(C)=O)cc6)[CH](C)O5)c4c(O)c3C(=O)c12)C(C)=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C[C@H]1[C@H]([C@H](C[C@@H](O1)O[C@H]2C[C@@](Cc3c2c(c4c(c3O)C(=O)c5cccc(c5C4=O)OC)O)(C(=O)C)O)O)[NH2+]Cc6ccc(cc6)C[NH2+][C@@H]7[C@@H](O[C@H](C[C@@H]7O)O[C@H]8C[C@@](Cc9c8c(c1c(c9O)C(=O)c2cccc(c2C1=O)OC)O)(C(=O)C)O)C
SMILES OpenEye OEToolkits 1.5.0 CC1C(C(CC(O1)OC2CC(Cc3c2c(c4c(c3O)C(=O)c5cccc(c5C4=O)OC)O)(C(=O)C)O)O)[NH2+]Cc6ccc(cc6)C[NH2+]C7C(OC(CC7O)OC8CC(Cc9c8c(c1c(c9O)C(=O)c2cccc(c2C1=O)OC)O)(C(=O)C)O)C
InChI InChI 1.03 InChI=1S/C62H64N2O20/c1-25-51(35(67)17-41(81-25)83-39-21-61(77,27(3)65)19-33-45(39)59(75)49-47(55(33)71)53(69)31-9-7-11-37(79-5)43(31)57(49)73)63-23-29-13-15-30(16-14-29)24-64-52-26(2)82-42(18-36(52)68)84-40-22-62(78,28(4)66)20-34-46(40)60(76)50-48(56(34)72)54(70)32-10-8-12-38(80-6)44(32)58(50)74/h7-16,25-26,35-36,39-42,51-52,63-64,67-68,71-72,75-78H,17-24H2,1-6H3/p+2/t25-,26-,35-,36-,39-,40-,41-,42-,51+,52+,61-,62-/m0/s1
InChIKey InChI 1.03 CRXRBKHVHUKITD-MJSRGEEMSA-P
Chemical Database Mapping
Database Reference ID
PubChem 42626500