Structural Complex
Chemical ID: U2G
IUPAC Name: URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@@H]2OCC[C@H]2O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4c(=O)[nH]cnc43)O2)c(=O)[nH]1
InChI: InChI=1S/C18H21N6O8P/c25-12-3-5-23(18(27)22-12)17-11(4-6-29-17)32-33(28)30-7-10-1-2-13(31-10)24-9-21-14-15(24)19-8-20-16(14)26/h3,5,8-11,13,17,33H,1-2,4,6-7H2,(H,19,20,26)(H,22,25,27)/t10-,11+,13+,17+/m0/s1
InChI Key: XFXDDFDGUFJMQW-RWYOIZDWSA-N
Physiochemical Descriptor:
Formula: C19 H24 N7 O13 P
Molecular weight: 589.407
Hydrogen Bond Acceptor: 18
Hydrogen Bond Donor: 8
Rotatable Bonds: 14
Heavy Atoms: 40
Systematic name
Program Version Descriptor
ACDLabs 10.04 [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4R,5R)-2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-3-yl hydrogen (S)-phosphate (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl [(2R,3R,4R,5R)-2-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1C=CN(C(=O)N1)C5OC(CO)C(O)C5OP(=O)(O)OCC4OC(n3cnc2c3N=C(N)NC2=O)C(O)C4O
SMILES_CANONICAL CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[C@@H]4[C@H](O)[C@@H](CO)O[C@H]4N5C=CC(=O)NC5=O)[C@@H](O)[C@H]3O
SMILES CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[CH]4[CH](O)[CH](CO)O[CH]4N5C=CC(=O)NC5=O)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[C@@H]4[C@@H]([C@H](O[C@H]4N5C=CC(=O)NC5=O)CO)O)O)O)N=C(NC2=O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OC4C(C(OC4N5C=CC(=O)NC5=O)CO)O)O)O)N=C(NC2=O)N
InChI InChI 1.03 InChI=1S/C19H24N7O13P/c20-18-23-14-9(15(32)24-18)21-5-26(14)16-12(31)10(29)7(38-16)4-36-40(34,35)39-13-11(30)6(3-27)37-17(13)25-2-1-8(28)22-19(25)33/h1-2,5-7,10-13,16-17,27,29-31H,3-4H2,(H,34,35)(H,22,28,33)(H3,20,23,24,32)/t6-,7-,10-,11-,12-,13-,16-,17-/m1/s1
InChIKey InChI 1.03 DFYLLEBFVZTKHD-VMIOUTBZSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB04514
PubChem 135403833
ZINC ZINC000058661254