Structural Complex
Chemical ID: UPA
IUPAC Name: URIDYLYL-2'-5'-PHOSPHO-ADENOSINE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@@H]2OCC[C@H]2O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4cncnc43)O2)c(=O)[nH]1
InChI: InChI=1S/C18H21N6O7P/c25-14-3-5-23(18(26)22-14)17-13(4-6-28-17)31-32(27)29-8-11-1-2-15(30-11)24-10-21-12-7-19-9-20-16(12)24/h3,5,7,9-11,13,15,17,32H,1-2,4,6,8H2,(H,22,25,26)/t11-,13+,15+,17+/m0/s1
InChI Key: OSUMEUXTEFNMNH-BYMSMCERSA-N
Physiochemical Descriptor:
Formula: C19 H24 N7 O12 P
Molecular weight: 573.407
Hydrogen Bond Acceptor: 18
Hydrogen Bond Donor: 7
Rotatable Bonds: 14
Heavy Atoms: 39
Systematic name
Program Version Descriptor
ACDLabs 10.04 [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3R,4R,5R)-2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-3-yl hydrogen (S)-phosphate (non-preferred name)
OpenEye OEToolkits 1.5.0 [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl [(2R,3R,4R,5R)-2-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-5-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1C=CN(C(=O)N1)C5OC(CO)C(O)C5OP(=O)(O)OCC4OC(n3cnc2c(ncnc23)N)C(O)C4O
SMILES_CANONICAL CACTVS 3.341 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[C@@H]4[C@H](O)[C@@H](CO)O[C@H]4N5C=CC(=O)NC5=O)[C@@H](O)[C@H]3O
SMILES CACTVS 3.341 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[CH]4[CH](O)[CH](CO)O[CH]4N5C=CC(=O)NC5=O)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[C@@H]4[C@@H]([C@H](O[C@H]4N5C=CC(=O)NC5=O)CO)O)O)O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC4C(C(OC4N5C=CC(=O)NC5=O)CO)O)O)O)N
InChI InChI 1.03 InChI=1S/C19H24N7O12P/c20-15-10-16(22-5-21-15)26(6-23-10)17-13(31)11(29)8(37-17)4-35-39(33,34)38-14-12(30)7(3-27)36-18(14)25-2-1-9(28)24-19(25)32/h1-2,5-8,11-14,17-18,27,29-31H,3-4H2,(H,33,34)(H2,20,21,22)(H,24,28,32)/t7-,8-,11-,12-,13-,14-,17-,18-/m1/s1
InChIKey InChI 1.03 QARCCHXXGAIRFS-KPKSGTNCSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB03447
PubChem 444053
ZINC ZINC000015268260