ISDA: 9ZPD

Deposition Date 2025-12-16

Release Date 2025-12-24

Last Version Date 2025-12-24

Entry Detail

PDB ID:

9ZPD

Keywords:

SIGNALING PROTEIN

Title:

Cryo-EM structure of human PI3KC3-C2 in complex with Rubicon Middle Region of C terminus

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.38 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Phosphoinositide 3-kinase regulatory subunit 4
Gene (Uniprot):PIK3R4
Chain IDs:A
Chain Length:1445
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:A0JP11 Pfam ID:PF00069, PF22956, PF00400

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Phosphatidylinositol 3-kinase catalytic subunit type 3
Gene (Uniprot):PIK3C3
Chain IDs:B
Chain Length:887
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q8NEB9 Pfam ID:PF00792, PF00613, PF00454 EC:2.7.1.137

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:UV radiation resistance-associated gene protein
Gene (Uniprot):UVRAG
Chain IDs:C
Chain Length:699
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9P2Y5 Pfam ID:PF00168, PF10186 EC:2.7.1.137

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beclin-1,Run domain Beclin-1-interacting and cysteine-rich domain-containing protein chimera
Gene (Uniprot):BECN1, RUBCN
Chain IDs:D, E
Chain Length:663
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q14457,Q92622 Pfam ID:PF15285, PF17675, PF04111, PF21054

Ligand Molecules

GTP

Primary Citation

Cryo-EM reconstruction of PI3KC3-C2 in complex with Rubicon Middle Region of C terminus

Chen, M, Ni, Q, Hurley, J.H.Show

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Primary Citation of related structures

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