ISDA: 9YZK

Deposition Date 2025-10-30

Release Date 2026-02-18

Last Version Date 2026-02-18

Entry Detail

PDB ID:

9YZK

Keywords:

DNA BINDING PROTEIN/DNA

Title:

Isoreticular co-crystal 1 with symmetrical expanded duplex (42mer) containing insert sequence ACCCTTCTATGACCTACTCCA

Biological Source:

Source Organism(s):

Escherichia coli (Taxon ID: 562)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

5.10 Å

R-Value Free:

0.30

R-Value Work:

0.27

R-Value Observed:

0.27

Space Group:

I 1 2 1

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Replication initiation protein
Gene (Uniprot):repE
Chain IDs:A (auth: C)
Chain Length:263
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P03856

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (42-MER)
Chain IDs:B (auth: E)
Chain Length:42
Number of Molecules:1
Biological Source:Escherichia coli

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (42-MER)
Chain IDs:C (auth: F)
Chain Length:42
Number of Molecules:1
Biological Source:Escherichia coli

Ligand Molecules

Primary Citation

Modular Scaffold Crystals for Programmable Installation and Structural Observation of DNA-Binding Proteins

Shields, E.T, Slaughter, C.K, Mekkaoui, F, Magna, E.N, Shepherd, C, Lukeman, P.S, Spratt, D.E, Snow, C.D.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form