9YEA image
Deposition Date 2025-09-23
Release Date 2025-11-05
Last Version Date 2025-11-05
Entry Detail
PDB ID:
9YEA
Keywords:
LIGASE
Title:
Structure of the isopeptide bond-linked UbcH5b~Ubiquitin conjugate complex for an M1K/C85K UbcH5b mutant
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.83 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 1 21 1
9YEA validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-conjugating enzyme E2 D2
Gene (Uniprot):UBE2D2
Mutagens:M1K, C85K
Chain IDs:A
Chain Length:152
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62837 Pfam ID:PF00179 EC:2.3.2.23
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin
Gene (Uniprot):UBC
Chain IDs:B
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P0CG48 Pfam ID:PF00240
Primary Citation
Functional and structural analyses of UbcH5 mutants with enhanced binding to the E3 ubiquitin ligase CHIP
Biochem.Biophys.Res.Commun. ? 152873 ? (2025)
DOI: 10.1016/j.bbrc.2025.152873
Primary Citation of related structures
9YEA