9Y0S image
Deposition Date 2025-08-29
Release Date 2025-10-08
Last Version Date 2025-10-08
Entry Detail
PDB ID:
9Y0S
Keywords:
Title:
CryoEM structure of alpha-synuclein fibril induced by psychosine
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.72 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Alpha-synuclein
Gene (Uniprot):SNCA
Chain IDs:A, B, C, D, E, F, G, H, I, J
Chain Length:140
Number of Molecules:10
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Leveraging bioorthogonal conjugation for alpha synuclein fibril surveillance.
Biorxiv ? ? ? (2025)
PMID: 41000844 DOI: 10.1101/2025.09.12.675751

Abstact

Alpha synuclein (α-syn) amyloid fibrils are associated with various neurodegenerative diseases. To better understand the molecular and cellular basis for α-syn fibril persistence and spread, we implemented a fluorophore labeling strategy to surveil pre-formed α-syn fibrils in solution and in cells. We leveraged amber codon mediated incorporation of a tetrazine-based artificial amino acid (TetV2.0) to install a cyclooctene-conjugated Janeliaflour, JF549, at four sites on human α-syn: residues 4, 60, 96 and 136. Fast coupling occurred under mild buffer conditions and in the presence of the disease-associated cofactor and cytotoxic lipid, psychosine. Labeled fibrils retained their polymorphic features, seeded the growth of new fibrils in vitro, and induced the seeding of positive puncta in α-syn FRET biosensor HEK293T cells. This allowed simultaneous tracking of exogenous and endogenous α-syn aggregates in biosensor cells, and their localization within the cells. In doing so, our approach facilitates more detailed mechanistic investigation of α-syn aggregates.

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Primary Citation of related structures