ISDA: 9XY5

Deposition Date 2025-08-25

Release Date 2025-09-10

Last Version Date 2025-09-10

Entry Detail

PDB ID:

9XY5

Keywords:

DNA BINDING PROTEIN

Title:

One of a series of engineered variants of I-OnuI meganuclease targeting altered DNA target sequence

Biological Source:

Source Organism(s):

synthetic construct (Taxon ID: 32630)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.61 Å

R-Value Free:

0.26

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 21 21 21

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Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:eI-OnuI_P456_AGT_2
Chain IDs:A
Chain Length:300
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (26-MER)
Chain IDs:B
Chain Length:26
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (26-MER)
Chain IDs:C
Chain Length:26
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

EDO

Primary Citation

Prediction, modeling and design of protein-DNA recognition via computational and machine learning approaches: accomplishments and remaining challenges

Esler, M.A, Werther, R, Bradley, P, Stoddard, B.L.Show

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Primary Citation of related structures

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