ISDA: 9WC0

Deposition Date 2025-08-15

Release Date 2026-02-18

Last Version Date 2026-02-18

Entry Detail

PDB ID:

9WC0

Keywords:

GENE REGULATION/DNA

Title:

The structure of NCP-RA module of ncBAF-nucleosome complex

Biological Source:

Source Organism(s):

Xenopus laevis (Taxon ID: 8355)
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)

Expression System(s):

Escherichia coli, Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.40 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H4
Chain IDs:A (auth: B), E (auth: F)
Chain Length:102
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P62799 Pfam ID:PF15511

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2A
Gene (Uniprot):LOC494591
Chain IDs:B (auth: C), F (auth: G)
Chain Length:129
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:Q6AZJ8 Pfam ID:PF00125, PF16211

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H2B 1.1
Chain IDs:C (auth: D), G (auth: H)
Chain Length:125
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P02281 Pfam ID:PF00125

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone H3.2
Chain IDs:D (auth: E), J (auth: K)
Chain Length:135
Number of Molecules:2
Biological Source:Xenopus laevis

UniProt ID:P84233 Pfam ID:PF00125

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (207-MER)
Chain IDs:H (auth: I)
Chain Length:207
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (207-MER)
Chain IDs:I (auth: J)
Chain Length:207
Number of Molecules:1
Biological Source:synthetic construct

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:B-cell CLL/lymphoma 7 protein family member A
Gene (Uniprot):BCL7A
Chain IDs:K (auth: O)
Chain Length:210
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q4VC05 Pfam ID:PF04714

Ligand Molecules

Primary Citation

ncBAF recognizes the nucleosome through BCL7A in chromatin remodeling.

Chen, K, Du, L, Liu, Y, Chen, M, Chen, Z.Show

Cell Discov 11 102 102 (2025)

PMID: 41402274 DOI: 10.1038/s41421-025-00858-1

Primary Citation of related structures

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