9UBQ image
Deposition Date 2025-04-03
Release Date 2025-10-29
Last Version Date 2025-11-05
Entry Detail
PDB ID:
9UBQ
Title:
HBsAg in complex with H020 Fab
Biological Source:
Source Organism:
Hepatitis B virus (Taxon ID: 10407)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.86 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Middle S protein
Gene (Uniprot):S
Mutagens:C131A, C145A, C276A
Chain IDs:A, D (auth: B)
Chain Length:281
Number of Molecules:2
Biological Source:Hepatitis B virus
Polymer Type:polypeptide(L)
Molecule:H020 Fab Heavy Chain
Chain IDs:B (auth: C), E
Chain Length:220
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:H020 Fab Light Chain
Chain IDs:C (auth: D), F
Chain Length:215
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The Symmetric Structure of the Antigenic Loop in Type B HBV Surface Antigen.
J.Mol.Biol. 437 169483 169483 (2025)
PMID: 41075972 DOI: 10.1016/j.jmb.2025.169483

Abstact

Hepatitis B virus (HBV) is an enveloped virus with HBV surface antigen (HBsAg) as the only protein on its viral membrane. The extracellular antigenic loop (AGL) of HBsAg plays a crucial role in viral attachment to host cells, serves as the primary target for neutralizing antibodies (NAbs), and is subject to escape mutations. Previous studies have shown that the AGL exhibits two different structures (Type A and Type B) dictated by distinct disulfide bond linkage. However, due to the flexibility of some regions in previous structure, the complete model of AGLType B and its symmetry remain elusive. Here, we present the cryo-EM structure of AGLType B in complex with the Fab fragment of the NAb H020. The complete structure of AGLType B reveals its two-fold symmetry and it can bind two FabH020 fragments simultaneously. Further analysis elucidates the underlying mechanism of pan-serotype neutralizing capability of H020 and how escape mutations hinder its binding.

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Protein

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Disease

Primary Citation of related structures