9U9D image
Deposition Date 2025-03-27
Release Date 2025-09-17
Last Version Date 2025-10-01
Entry Detail
PDB ID:
9U9D
Title:
Bipartite Genetically Encoded Biosensor sG-GECO1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 41 21 2
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Myosin light chain kinase, smooth muscle, deglutamylated form,Green fluorescent protein,Calmodulin-1
Gene (Uniprot):Calm1, Mylk, GFP
Chain IDs:A
Chain Length:234
Number of Molecules:1
Biological Source:synthetic construct, Gallus gallus, Aequorea victoria, Rattus norvegicus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Green fluorescent protein
Gene (Uniprot):GFP
Chain IDs:B
Chain Length:234
Number of Molecules:1
Biological Source:Aequorea victoria
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CRO B SER chromophore
Primary Citation
Bipartite Genetically Encoded Biosensors to Sense Calcium Ion Dynamics at Membrane-Membrane Contact Sites.
Anal.Chem. 97 19848 19861 (2025)
PMID: 40888292 DOI: 10.1021/acs.analchem.5c03831

Abstact

Self-complementing bipartite fluorescent proteins (FPs) are useful tools for the detection of protein-protein proximity and for localizing fluorophores to membrane-membrane contact sites. Here, we report versions of circularly permuted green FP (GFP), red FP (RFP), and mNeonGreen (NG), which are split into a large fragment composed of nine β-strands and a small fragment composed of two β-strands. In each case, the large and small fragments can associate in live cells to form the complete 11-stranded FP β-barrel. We further converted each of these three self-complementing FPs into bipartite calcium ion (Ca2+) biosensors. We demonstrate that appropriately targeted versions of these split FPs, and split FP-based biosensors, can be functionally assembled at membrane-membrane contact sites. We employ the bipartite NG-based Ca2+ biosensor for visualization of pharmacologically induced Ca2+ release at mitochondria-endoplasmic reticulum contact sites (MERCs).

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Primary Citation of related structures