9U7E image
Deposition Date 2025-03-24
Release Date 2026-01-21
Last Version Date 2026-01-21
Entry Detail
PDB ID:
9U7E
Keywords:
Title:
FGFR2 kinase domain with a macrocyclic compound 8g
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.31
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fibroblast growth factor receptor 2
Gene (Uniprot):FGFR2
Chain IDs:A, B
Chain Length:304
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Design, Synthesis, and Biological Evaluation of the First Novel Macrocycle-Based FGFR Inhibitors That Overcome Clinically Acquired Resistance.
J.Med.Chem. ? ? ? (2026)
PMID: 41490805 DOI: 10.1021/acs.jmedchem.5c02462

Abstact

Alterations in the FGFR family act as oncogenic drivers for multiple pediatric and adult tumors, leading to the development and approval of several FGFR inhibitors. However, the on-target gatekeeper and "molecular brake" mutations confer clinically acquired resistance to the FDA-approved FGFR inhibitors, which presents a significant unmet medical need. Herein, we report the first novel macrocycle-based FGFR inhibitors targeting both wild-type and clinically acquired variants of the FGFR family. The representative compound 8r potently inhibited FGFR1/2/3 with IC50 values of 10.0, 6.9, and 30.2 nM, respectively. Compound 8r also potently suppressed proliferation of a series of FGFR-driven cancer cell lines with IC50 values of 2.0-13.3 nM. Compared with futibatinib, 8r exhibited superior inhibitory activity toward FGFR1V561M, FGFR2V564F, and FGFR2N549K mutations with IC50 values of 6.8, 0.7, and 0.8 nM, respectively. Moreover, 8r demonstrated favorable antitumor efficacy in an RT112/84 bladder cancer xenograft model. This work provides a promising macrocycle-based lead compound for the treatment of FGFR-driven cancers.

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Primary Citation of related structures
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