9TM6 image
Deposition Date 2025-12-12
Release Date 2025-12-31
Last Version Date 2025-12-31
Entry Detail
PDB ID:
9TM6
Keywords:
RNA BINDING PROTEIN
Title:
Structure of duck RIG-I (delta CARDs) bound to 31-mer RNA mismatched hairpin with 5'pppG-C blunt end mimicking the influenza A virus vRNA promoter (panhandle) and to ADP.
Biological Source:
Source Organism:
Anas platyrhynchos (Taxon ID: 8839)
Influenza A virus (Taxon ID: 11320)
Host Organism:
Spodoptera frugiperda
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.98 Å
R-Value Free:
0.25
R-Value Work:
0.20
Space Group:
C 2 2 21
9TM6 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RNA helicase
Gene (Uniprot):RIG-I
Chain IDs:A
Chain Length:692
Number of Molecules:1
Biological Source:Anas platyrhynchos
UniProt ID:D3TI84 Pfam ID:PF00270, PF18119, PF00271, PF11648
Polymer Type:polyribonucleotide
Molecule:31-mer RNA hairpin with 5'pppG-C blunt end mimicking the influenza A virus vRNA promoter (panhandle)
Chain IDs:B (auth: R)
Chain Length:30
Number of Molecules:1
Biological Source:Influenza A virus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSO A CYS modified residue
Ligand Molecules
ADP
CL
GTP
MG
ZN
Primary Citation
High resolution crystal structures of duck RIG-I and chicken LGP2 bound to non-canonical duplexes mimicking the influenza virus vRNA promoter (panhandle).
To Be Published ? ? ? (?)
Primary Citation of related structures
9TKV
9TL1
Feedback Form
Name
Email
Institute
Feedback