9TBE image
Deposition Date 2025-11-19
Release Date 2025-12-17
Last Version Date 2025-12-17
Entry Detail
PDB ID:
9TBE
Title:
Cryo-EM structure of the light-driven sodium pump ErNaR in the monomeric form in the K2 state
Biological Source:
Source Organism(s):
Erythrobacter (Taxon ID: 1041)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bacteriorhodopsin-like protein
Chain IDs:A (auth: D)
Chain Length:272
Number of Molecules:1
Biological Source:Erythrobacter
Primary Citation
Microsecond Time-Resolved Cryo-EM Based on Jet Vitrification.
Biorxiv ? ? ? (2025)
PMID: 41332690 DOI: 10.1101/2025.11.21.689681

Abstact

Understanding and ultimately predicting the function of proteins is one of the frontiers in structural biology. This will only be possible if it becomes feasible to routinely observe proteins on the fast timescales on which they perform their tasks. Recently, laser flash melting and revitrification experiments have improved the time resolution of cryo-electron microscopy (cryo-EM) to microseconds, rendering it fast enough to observe the domain motions of proteins that are frequently linked to function. However, observations have been limited to a time window of just a few hundred microseconds. Here, we introduce time-resolved cryo-EM experiments based on jet vitrification that combine microsecond resolution with an observation window of up to seconds. We use a short laser pulse to initiate protein dynamics, and as they unfold, vitrify the sample with a jet of a liquid cryogen to arrest the dynamics at that point in time. We demonstrate that our approach affords near-atomic spatial resolution and a time resolution of 21 µs. This allows us to observe the photoinduced dynamics of the light-driven sodium pump Er NaR on the microsecond to millisecond timescale. Our experiments significantly expand the ability of cryo-EM to observe protein dynamics across multiple timescales.

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