ISDA: 9T74

Deposition Date 2025-11-10

Release Date 2026-03-04

Last Version Date 2026-03-04

Entry Detail

PDB ID:

9T74

Keywords:

RNA

Title:

2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: RBD-aptamer)

Biological Source:

Source Organism(s):

synthetic RNA (Taxon ID: 2086595)
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)

Expression System(s):

Synthetic construct, Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.46 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polyribonucleotide
Molecule:DNA/RNA (51-MER)
Chain IDs:A
Chain Length:51
Number of Molecules:1
Biological Source:synthetic RNA

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:B
Chain Length:1134
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601

Ligand Molecules

Primary Citation

Serum-stable RNA origami nano-devices

Kristoffersen, E.L, Zwergius, N.H, Vallina, N.S, Gluck, N, Stange, A, Desdorf, L, Civit, L, Geary, C, Kjems, J, Valero, J, Andersen, E.S.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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